Complementarity to an miRNA seed region is sufficient to induce moderate repression of a target transcript in the unicellular green alga Chlamydomonas reinhardtii T Yamasaki, A Voshall, EJ Kim, E Moriyama, H Cerutti, T Ohama The Plant Journal 76 (6), 1045-1056, 2013 | 51 | 2013 |
Next-generation transcriptome assembly: strategies and performance analysis A Voshall, EN Moriyama Bioinformatics in the era of post genomics and big data, 15-36, 2018 | 37 | 2018 |
Small Interfering RNA–Mediated Translation Repression Alters Ribosome Sensitivity to Inhibition by Cycloheximide in Chlamydomonas reinhardtii X Ma, EJ Kim, I Kook, F Ma, A Voshall, E Moriyama, H Cerutti The Plant Cell 25 (3), 985-998, 2013 | 35 | 2013 |
Identification of AGO3-Associated miRNAs and Computational Prediction of Their Targets in the Green Alga Chlamydomonas reinhardtii A Voshall, EJ Kim, X Ma, EN Moriyama, H Cerutti Genetics 200 (1), 105-121, 2015 | 32 | 2015 |
Next-generation transcriptome assembly and analysis: Impact of ploidy A Voshall, EN Moriyama Methods 176, 14-24, 2020 | 29 | 2020 |
miRNAs in the alga Chlamydomonas reinhardtii are not phylogenetically conserved and play a limited role in responses to nutrient deprivation A Voshall, EJ Kim, X Ma, T Yamasaki, EN Moriyama, H Cerutti Scientific reports 7 (1), 5462, 2017 | 26 | 2017 |
Sterol Biosynthesis in four green algae: A bioinformatic analysis of the ergosterol versus phytosterol decision point A Voshall, NTM Christie, SL Rose, M Khasin, JL Van Etten, JE Markham, ... Journal of phycology 57 (4), 1199-1211, 2021 | 17 | 2021 |
Plant transcriptome assembly: review and benchmarking S Behera, A Voshall Bioinformatics, 2022 | 12 | 2022 |
A consensus-based ensemble approach to improve transcriptome assembly A Voshall, S Behera, X Li, XH Yu, K Kapil, JS Deogun, J Shanklin, ... BMC bioinformatics 22, 1-24, 2021 | 8 | 2021 |
Formal concept analysis applications in bioinformatics S Roscoe, M Khatri, A Voshall, S Batra, S Kaur, J Deogun ACM Computing Surveys 55 (8), 1-40, 2022 | 7 | 2022 |
Bioinformatics in the era of post genomics and big data A Voshall, EN Moriyama, I Abdurakhmonov | 6 | 2018 |
Small RNAs> 26 nt in length associate with AGO1 and are upregulated by nutrient deprivation in the alga Chlamydomonas Y Li, EJ Kim, A Voshall, EN Moriyama, H Cerutti The Plant Cell 35 (6), 1868-1887, 2023 | 5 | 2023 |
Performance comparison and an ensemble approach of transcriptome assembly S Behera, A Voshall, JS Deogun, EN Moriyama 2017 IEEE international conference on bioinformatics and biomedicine (BIBM …, 2017 | 5 | 2017 |
Complete Genome Sequence of Geobacter sp. Strain FeAm09, a Moderately Acidophilic Soil Bacterium P Yadav, S Antony-Babu, E Hayes, OM Healy, D Pan, WH Yang, ... Microbiology resource announcements 10 (2), 10.1128/mra. 00979-20, 2021 | 4 | 2021 |
Divergent evolution of extreme production of variant plant monounsaturated fatty acids L Gan, K Park, J Chai, EM Updike, H Kim, A Voshall, S Behera, XH Yu, ... Proceedings of the National Academy of Sciences 119 (30), e2201160119, 2022 | 3 | 2022 |
A consensus-based ensemble approach to improve de novo transcriptome assembly A Voshall, S Behera, X Li, XH Yu, K Kapil, JS Deogun, J Shanklin, ... BioRxiv, 2020.06. 08.139964, 2020 | 3 | 2020 |
Interpretable image classification model using formal concept analysis based classifier M Khatri, A Voshall, SK Batra, S Kaur, JS Deogun EPiC Ser Comput 83, 86-95, 2022 | 1 | 2022 |
Consensus Ensemble Approaches Improve De Novo Transcriptome Assemblies A Voshall | 1 | 2018 |
Pan-cancer analysis reveals multifaceted roles of retrotransposon-fusion RNAs B Lee, J Park, A Voshall, E Maury, Y Kang, YJ Kim, JY Lee, HR Shim, ... bioRxiv, 2023 | | 2023 |
Pan-cancer analysis reveals roles of retrotransposon-fusion RNAs EA Lee, B Lee, Y Choi, J Park, A Voshall, E Maury, Y Kang, YJ Kim, ... Cancer Research 83 (7_Supplement), 1122-1122, 2023 | | 2023 |