Levi Waldron
Levi Waldron
City University of New York School of Public Health
Verified email at sph.cuny.edu - Homepage
Title
Cited by
Cited by
Year
Metagenomic biomarker discovery and explanation
N Segata, J Izard, L Waldron, D Gevers, L Miropolsky, WS Garrett, ...
Genome biology 12 (6), 1-18, 2011
42712011
Orchestrating high-throughput genomic analysis with Bioconductor
W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ...
Nature methods 12 (2), 115-121, 2015
17062015
Metagenomic microbial community profiling using unique clade-specific marker genes
N Segata, L Waldron, A Ballarini, V Narasimhan, O Jousson, ...
Nature methods 9 (8), 811-814, 2012
10772012
Stem cell gene expression programs influence clinical outcome in human leukemia
K Eppert, K Takenaka, ER Lechman, L Waldron, B Nilsson, P Van Galen, ...
Nature medicine 17 (9), 1086-1093, 2011
7852011
Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples
N Segata, SK Haake, P Mannon, KP Lemon, L Waldron, D Gevers, ...
Genome biology 13 (6), R42, 2012
5622012
Assessment of colorectal cancer molecular features along bowel subsites challenges the conception of distinct dichotomy of proximal versus distal colorectum
M Yamauchi, T Morikawa, A Kuchiba, Y Imamura, ZR Qian, R Nishihara, ...
Gut 61 (6), 847-854, 2012
4342012
A guide to enterotypes across the human body: meta-analysis of microbial community structures in human microbiome datasets
O Koren, D Knights, A Gonzalez, L Waldron, N Segata, R Knight, ...
PLoS Comput Biol 9 (1), e1002863, 2013
4082013
Comprehensive MicroRNA profiling for head and neck squamous cell carcinomas
ABY Hui, M Lenarduzzi, T Krushel, L Waldron, M Pintilie, W Shi, ...
Clinical cancer research 16 (4), 1129-1139, 2010
4082010
Relating the metatranscriptome and metagenome of the human gut
EA Franzosa, XC Morgan, N Segata, L Waldron, J Reyes, AM Earl, ...
Proceedings of the National Academy of Sciences 111 (22), E2329-E2338, 2014
3862014
MicroRNA-301 mediates proliferation and invasion in human breast cancer
W Shi, K Gerster, NM Alajez, J Tsang, L Waldron, M Pintilie, AB Hui, ...
Cancer research 71 (8), 2926-2937, 2011
2442011
mRNA transcript quantification in archival samples using multiplexed, color-coded probes
PP Reis, L Waldron, RS Goswami, W Xu, Y Xuan, B Perez-Ordonez, ...
BMC biotechnology 11 (1), 46, 2011
2122011
Machine learning meta-analysis of large metagenomic datasets: tools and biological insights
E Pasolli, DT Truong, F Malik, L Waldron, N Segata
PLoS computational biology 12 (7), e1004977, 2016
1782016
Risk prediction for late-stage ovarian cancer by meta-analysis of 1525 patient samples
M Riester, W Wei, L Waldron, AC Culhane, L Trippa, E Oliva, S Kim, ...
JNCI: Journal of the National Cancer Institute 106 (5), 2014
1432014
Genotype and time of day shape the Populus drought response
O Wilkins, L Waldron, H Nahal, NJ Provart, MM Campbell
The Plant Journal 60 (4), 703-715, 2009
1242009
curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome
BF Ganzfried, M Riester, B Haibe-Kains, T Risch, S Tyekucheva, I Jazic, ...
Database 2013, 2013
1212013
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ...
Nature medicine 25 (4), 679-689, 2019
1162019
Associations between host gene expression, the mucosal microbiome, and clinical outcome in the pelvic pouch of patients with inflammatory bowel disease
XC Morgan, B Kabakchiev, L Waldron, AD Tyler, TL Tickle, R Milgrom, ...
Genome biology 16 (1), 1-15, 2015
1102015
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation
AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ...
Nature medicine 25 (4), 667-678, 2019
1012019
Racial/ethnic disparities in genomic sequencing
DE Spratt, T Chan, L Waldron, C Speers, FY Feng, OO Ogunwobi, ...
JAMA oncology 2 (8), 1070-1074, 2016
952016
Accessible, curated metagenomic data through ExperimentHub
E Pasolli, L Schiffer, P Manghi, A Renson, V Obenchain, DT Truong, ...
Nature methods 14 (11), 1023, 2017
942017
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