| An updated evolutionary classification of CRISPR–Cas systems KS Makarova, YI Wolf, OS Alkhnbashi, F Costa, SA Shah, SJ Saunders, ... Nature Reviews Microbiology 13 (11), 722-736, 2015 | 2153 | 2015 |
| Evolutionary classification of CRISPR–Cas systems: a burst of class 2 and derived variants KS Makarova, YI Wolf, J Iranzo, SA Shmakov, OS Alkhnbashi, SJJ Brouns, ... Nature Reviews Microbiology 18 (2), 67-83, 2020 | 809 | 2020 |
| Protospacer recognition motifs: mixed identities and functional diversity SA Shah, S Erdmann, FJM Mojica, RA Garrett RNA biology 10 (5), 891-899, 2013 | 380 | 2013 |
| CRISPR families of the crenarchaeal genus Sulfolobus: bidirectional transcription and dynamic properties RK Lillestøl, SA Shah, K Brügger, P Redder, H Phan, J Christiansen, ... Molecular microbiology 72 (1), 259-272, 2009 | 272 | 2009 |
| A novel interference mechanism by a type IIIB CRISPR‐Cmr module in Sulfolobus L Deng, RA Garrett, SA Shah, X Peng, Q She Molecular microbiology 87 (5), 1088-1099, 2013 | 255 | 2013 |
| Large-scale association analyses identify host factors influencing human gut microbiome composition A Kurilshikov, C Medina-Gomez, R Bacigalupe, D Radjabzadeh, J Wang, ... Nature genetics 53 (2), 156-165, 2021 | 139 | 2021 |
| CRISPR adaptive immune systems of Archaea G Vestergaard, RA Garrett, SA Shah RNA biology 11 (2), 156-167, 2014 | 135 | 2014 |
| Genome Analyses of Icelandic Strains of Sulfolobus islandicus, Model Organisms for Genetic and Virus-Host Interaction Studies L Guo, K Brügger, C Liu, SA Shah, H Zheng, Y Zhu, S Wang, RK Lillestøl, ... Journal of bacteriology 193 (7), 1672-1680, 2011 | 133 | 2011 |
| Distribution of CRISPR spacer matches in viruses and plasmids of crenarchaeal acidothermophiles and implications for their inhibitory mechanism SA Shah, NR Hansen, RA Garrett Biochemical Society Transactions 37 (1), 23-28, 2009 | 119 | 2009 |
| Archaeal CRISPR-based immune systems: exchangeable functional modules RA Garrett, G Vestergaard, SA Shah Trends in microbiology 19 (11), 549-556, 2011 | 109 | 2011 |
| CRISPR/Cas and Cmr modules, mobility and evolution of adaptive immune systems SA Shah, RA Garrett Research in Microbiology 162 (1), 27-38, 2011 | 108 | 2011 |
| Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism P Redder, X Peng, K Brügger, SA Shah, F Roesch, B Greve, Q She, ... Environmental Microbiology 11 (11), 2849-2862, 2009 | 103 | 2009 |
| Type IV CRISPR–Cas systems are highly diverse and involved in competition between plasmids R Pinilla-Redondo, D Mayo-Muñoz, J Russel, RA Garrett, L Randau, ... Nucleic acids research 48 (4), 2000-2012, 2020 | 84 | 2020 |
| Characterizing leader sequences of CRISPR loci OS Alkhnbashi, SA Shah, RA Garrett, SJ Saunders, F Costa, R Backofen Bioinformatics 32 (17), i576-i585, 2016 | 72 | 2016 |
| CRISPRstrand: predicting repeat orientations to determine the crRNA-encoding strand at CRISPR loci OS Alkhnbashi, F Costa, SA Shah, RA Garrett, SJ Saunders, R Backofen Bioinformatics 30 (17), i489-i496, 2014 | 63 | 2014 |
| CRISPR-based immune systems of the Sulfolobales: complexity and diversity RA Garrett, SA Shah, G Vestergaard, L Deng, S Gudbergsdottir, ... Biochemical Society Transactions 39 (1), 51-57, 2011 | 62 | 2011 |
| Stygiolobus Rod-Shaped Virus and the Interplay of Crenarchaeal Rudiviruses with the CRISPR Antiviral System G Vestergaard, SA Shah, A Bize, W Reitberger, M Reuter, H Phan, ... Journal of bacteriology 190 (20), 6837-6845, 2008 | 60 | 2008 |
| Comprehensive search for accessory proteins encoded with archaeal and bacterial type III CRISPR-cas gene cassettes reveals 39 new cas gene families SA Shah, OS Alkhnbashi, J Behler, W Han, Q She, WR Hess, RA Garrett, ... RNA biology 16 (4), 530-542, 2019 | 59 | 2019 |
| Archaeal extrachromosomal genetic elements H Wang, N Peng, SA Shah, L Huang, Q She Microbiology and Molecular Biology Reviews 79 (1), 117-152, 2015 | 58 | 2015 |
| CRISPRCasTyper: automated identification, annotation, and classification of CRISPR-Cas Loci J Russel, R Pinilla-Redondo, D Mayo-Muñoz, SA Shah, SJ Sørensen The CRISPR journal 3 (6), 462-469, 2020 | 51 | 2020 |
