Valerie D. Daggett

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Alan FershtEmeritus Group Leader, MRC Laboratory of Molecular Biology, University of CambridgeVerified email at cam.ac.uk
David A. C. BeckAssoc. Res. Prof. (Chem. Eng.) Dir. of Res. (eScience Institute), UWVerified email at uw.edu
Michael LevittStructural Biology, Stanford UniversityVerified email at stanford.edu
Mari L. DeMarcoUniversity of British ColumbiaVerified email at ubc.ca
Matthew Carter ChildersUniversity of Washington Department of BioengineeringVerified email at uw.edu
Marc van der KampAssociate Professor, University of BristolVerified email at bris.ac.uk
Christopher M JohnsonMRC Laboratory of Molecular BiologyVerified email at mrc-lmb.cam.ac.uk
Rudesh D. ToofannyArzeda Corp.Verified email at uw.edu
Stefano GianniVerified email at uniroma1.it
Michael RegnierUniversity of WashingtonVerified email at uw.edu
Steven RysavyLumedicVerified email at lumedic.io
Ugo MayorUniversity of the Basque Country UPV/EHU & IkerbasqueVerified email at ehu.eus
Michelle E. McCullyAssociate Professor, Santa Clara UniversityVerified email at scu.edu
Dennis BromleyTableau, Salesforce, Harvard University, University of WashingtonVerified email at post.harvard.edu
Noah C. BensonUniversity of WashingtonVerified email at uw.edu
Eric D. MerkleyChemical and Biological Signatures, Pacific Northwest National LaboratoryVerified email at pnnl.gov
Andrew M. SimmsAffiliate Assistant Professor, University of WashingtonVerified email at uw.edu
Kam-Bo WONGProfessor, School of Life Sciences, The Chinese University of Hong KongVerified email at cuhk.edu.hk
James D BryersUniversity of WashingtonVerified email at uw.edu
Clare-Louise TowseUniversity of BradfordVerified email at bradford.ac.uk

Valerie D. Daggett

Professor of Bioengineering, University of Washington

Verified email at uw.edu - Homepage

Amyloid diseases alpha-sheet protein folding and unfolding molecular dynamics big data


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
The molecular basis for the chemical denaturation of proteins by urea BJ Bennion, V Daggett Proceedings of the National Academy of Sciences 100 (9), 5142-5147, 2003	1089	2003
Calibration and testing of a water model for simulation of the molecular dynamics of proteins and nucleic acids in solution M Levitt, M Hirshberg, R Sharon, KE Laidig, V Daggett The Journal of Physical Chemistry B 101 (25), 5051-5061, 1997	678	1997
Protein folding and unfolding at atomic resolution AR Fersht, V Daggett Cell 108 (4), 573-582, 2002	640	2002
Is there a unifying mechanism for protein folding? V Daggett, AR Fersht Trends in biochemical sciences 28 (1), 18-25, 2003	620	2003
Potential energy function and parameters for simulations of the molecular dynamics of proteins and nucleic acids in solution M Levitt, M Hirshberg, R Sharon, V Daggett Computer physics communications 91 (1-3), 215-231, 1995	601	1995
The complete folding pathway of a protein from nanoseconds to microseconds U Mayor, NR Guydosh, CM Johnson, JG Grossmann, S Sato, GS Jas, ... Nature 421 (6925), 863-867, 2003	597	2003
The molecular mechanism of stabilization of proteins by TMAO and its ability to counteract the effects of urea Q Zou, BJ Bennion, V Daggett, KP Murphy Journal of the American Chemical Society 124 (7), 1192-1202, 2002	551	2002
The present view of the mechanism of protein folding V Daggett, A Fersht Nature Reviews Molecular Cell Biology 4 (6), 497-502, 2003	535	2003
Protein folding and unfolding in microseconds to nanoseconds by experiment and simulation U Mayor, CM Johnson, V Daggett, AR Fersht Proceedings of the National Academy of Sciences 97 (25), 13518-13522, 2000	427	2000
Increasing temperature accelerates protein unfolding without changing the pathway of unfolding R Day, BJ Bennion, S Ham, V Daggett Journal of molecular biology 322 (1), 189-203, 2002	405	2002
From conversion to aggregation: protofibril formation of the prion protein ML DeMarco, V Daggett Proceedings of the National Academy of Sciences 101 (8), 2293-2298, 2004	390	2004
Counteraction of urea-induced protein denaturation by trimethylamine N-oxide: a chemical chaperone at atomic resolution BJ Bennion, V Daggett Proceedings of the National Academy of Sciences 101 (17), 6433-6438, 2004	384	2004
Distance restraints from crosslinking mass spectrometry: mining a molecular dynamics simulation database to evaluate lysine–lysine distances ED Merkley, S Rysavy, A Kahraman, RP Hafen, V Daggett, JN Adkins Protein science 23 (6), 747-759, 2014	320	2014
Unifying features in protein-folding mechanisms S Gianni, NR Guydosh, F Khan, TD Caldas, U Mayor, GWN White, ... Proceedings of the National Academy of Sciences 100 (23), 13286-13291, 2003	318	2003
Characterization of the transition state of protein unfolding by use of molecular dynamics: chymotrypsin inhibitor 2. A Li, V Daggett Proceedings of the National Academy of Sciences 91 (22), 10430-10434, 1994	311	1994
The molecular basis for the inverse temperature transition of elastin B Li, DOV Alonso, V Daggett Journal of molecular biology 305 (3), 581-592, 2001	299	2001
Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations A Li, V Daggett Journal of molecular biology 257 (2), 412-429, 1996	292	1996
Can non-mechanical proteins withstand force? Stretching barnase by atomic force microscopy and molecular dynamics simulation RB Best, B Li, A Steward, V Daggett, J Clarke Biophysical journal 81 (4), 2344-2356, 2001	285	2001
Methods for molecular dynamics simulations of protein folding/unfolding in solution DAC Beck, V Daggett Methods 34 (1), 112-120, 2004	276	2004
Molecular dynamics simulations of helix denaturation V Daggett, M Levitt Journal of molecular biology 223 (4), 1121-1138, 1992	276	1992

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