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Christoph Sommer
Christoph Sommer
Verified email at ist.ac.at
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Ilastik: Interactive learning and segmentation toolkit
C Sommer, C Straehle, U Koethe, FA Hamprecht
2011 IEEE international symposium on biomedical imaging: From nano to macro …, 2011
11162011
Fluorogenic probes for live-cell imaging of the cytoskeleton
G Lukinavičius, L Reymond, E D'este, A Masharina, F Göttfert, H Ta, ...
Nature methods 11 (7), 731-733, 2014
6622014
Machine learning in cell biology–teaching computers to recognize phenotypes
C Sommer, DW Gerlich
Journal of cell science 126 (24), 5529-5539, 2013
3122013
Visualizing a homogeneous blend in bulk heterojunction polymer solar cells by analytical electron microscopy
M Pfannmöller, H Flügge, G Benner, I Wacker, C Sommer, ...
Nano letters 11 (8), 3099-3107, 2011
1932011
Automated detection and segmentation of synaptic contacts in nearly isotropic serial electron microscopy images
A Kreshuk, CN Straehle, C Sommer, U Koethe, M Cantoni, G Knott, ...
PloS one 6 (10), e24899, 2011
1452011
Learning-based mitotic cell detection in histopathological images
C Sommer, L Fiaschi, FA Hamprecht, DW Gerlich
Proceedings of the 21st International Conference on Pattern Recognition …, 2012
1062012
A practical guide to optimization in X10 expansion microscopy
S Truckenbrodt, C Sommer, SO Rizzoli, JG Danzl
Nature Protocols 14 (3), 832-863, 2019
692019
A deep learning and novelty detection framework for rapid phenotyping in high-content screening
C Sommer, R Hoefler, M Samwer, DW Gerlich
Molecular biology of the cell 28 (23), 3428-3436, 2017
622017
Efficacy and mechanism of action of volasertib, a potent and selective inhibitor of Polo-like kinases, in preclinical models of acute myeloid leukemia
D Rudolph, MA Impagnatiello, C Blaukopf, C Sommer, DW Gerlich, ...
Journal of Pharmacology and Experimental Therapeutics 352 (3), 579-589, 2015
572015
From experimental setup to bioinformatics: An RNAi screening platform to identify host factors involved in HIV‐1 replication
K Börner, J Hermle, C Sommer, NP Brown, B Knapp, B Glass, J Kunkel, ...
Biotechnology Journal: Healthcare Nutrition Technology 5 (1), 39-49, 2010
562010
Impact of neoadjuvant chemotherapy on hypertrophy of the future liver remnant after associating liver partition and portal vein ligation for staged hepatectomy
M Kremer, G Manzini, B Hristov, G Polychronidis, T Mokry, CM Sommer, ...
Journal of the American College of Surgeons 221 (3), 717-728. e1, 2015
432015
Automated segmentation of synapses in 3D EM data
A Kreshuk, CN Straehle, C Sommer, U Koethe, G Knott, FA Hamprecht
2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …, 2011
362011
Learning of optimal illumination for material classification
M Jehle, C Sommer, B Jähne
Joint Pattern Recognition Symposium, 563-572, 2010
362010
Semi-automated quantification of living cells with internalized nanostructures
MB Margineanu, K Julfakyan, C Sommer, JE Perez, MF Contreras, ...
Journal of nanobiotechnology 14 (1), 1-13, 2016
202016
Biomedical imaging: from Nano to Macro
C Sommer, C Straehle, U Kothe, FA Hamprecht
2011 IEEE International Symposium on 230, 233, 2011
162011
CellH5: a format for data exchange in high-content screening
C Sommer, M Held, B Fischer, W Huber, DW Gerlich
Bioinformatics 29 (12), 1580-1582, 2013
102013
Computational analysis of filament polymerization dynamics in cytoskeletal networks
P Caldas, P Radler, C Sommer, M Loose
Methods in Cell Biology 158, 145-161, 2020
62020
Interactive learning for the analysis of biomedical and industrial imagery
C Sommer
62010
Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development
J Morandell, LA Schwarz, B Basilico, S Tasciyan, G Dimchev, A Nicolas, ...
Nature communications 12 (1), 1-22, 2021
52021
CHD8 haploinsufficiency alters the developmental trajectories of human excitatory and inhibitory neurons linking autism phenotypes with transient cellular defects
CE Villa, C Cheroni, A López-Tóbon, CP Dotter, B Oliveira, R Sacco, ...
bioRxiv, 2020
32020
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Articles 1–20