Suparna Mitra
Suparna Mitra
Senior lecturer in Microbiomics and Bioinformatics, Lead for Microbiome and AMR in LIMCs
Verified email at - Homepage
Cited by
Cited by
MEGAN community edition-interactive exploration and analysis of large-scale microbiome sequencing data
DH Huson, S Beier, I Flade, A Górska, M El-Hadidi, S Mitra, ...
PLoS computational biology 12 (6), e1004957, 2016
Integrative analysis of environmental sequences using MEGAN4
DH Huson, S Mitra, HJ Ruscheweyh, N Weber, SC Schuster
Genome research 21 (9), 1552-1560, 2011
A randomised trial of the effect of omega-3 polyunsaturated fatty acid supplements on the human intestinal microbiota
H Watson, S Mitra, FC Croden, M Taylor, HM Wood, SL Perry, JA Spencer, ...
Gut 67 (11), 1974-1983, 2018
Effects of surgical and dietary weight loss therapy for obesity on gut microbiota composition and nutrient absorption
A Damms-Machado, S Mitra, AE Schollenberger, KM Kramer, T Meile, ...
BioMed research international 2015, 2015
Methods for comparative metagenomics
DH Huson, DC Richter, S Mitra, AF Auch, SC Schuster
BMC bioinformatics 10 (1), 1-10, 2009
Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG
S Mitra, P Rupek, DC Richter, T Urich, JA Gilbert, F Meyer, A Wilke, ...
BMC bioinformatics 12 (1), 1-8, 2011
Microbiota Supplementation with Bifidobacterium and Lactobacillus Modifies the Preterm Infant Gut Microbiota and Metabolome: An Observational Study
C Alcon-Giner, MJ Dalby, S Caim, J Ketskemety, A Shaw, K Sim, ...
Cell Reports Medicine 1 (5), 100077, 2020
Bifidobacterium breve reduces apoptotic epithelial cell shedding in an exopolysaccharide and MyD88-dependent manner
KR Hughes, LC Harnisch, C Alcon-Giner, S Mitra, CJ Wright, ...
Open biology 7 (1), 160155, 2017
In silico analyses of metagenomes from human atherosclerotic plaque samples
S Mitra, DI Drautz-Moses, M Alhede, MT Maw, Y Liu, RW Purbojati, ...
Microbiome 3 (1), 1-14, 2015
Introduction to the analysis of environmental sequences: metagenomics with MEGAN
DH Huson, S Mitra
Evolutionary Genomics, 415-429, 2012
Analysis of 16S rRNA environmental sequences using MEGAN
S Mitra, M Stärk, DH Huson
BMC genomics 12 (3), 1-7, 2011
Visual and statistical comparison of metagenomes
S Mitra, B Klar, DH Huson
Bioinformatics 25 (15), 1849-1855, 2009
Comparison of multiple metagenomes using phylogenetic networks based on ecological indices
S Mitra, JA Gilbert, D Field, DH Huson
The ISME journal 4 (10), 1236-1242, 2010
Diversity and distribution of Archaea in the mangrove sediment of Sundarbans
A Bhattacharyya, NS Majumder, P Basak, S Mukherji, D Roy, S Nag, ...
Archaea 2015, 2015
Analysis of the intestinal microbiota using SOLiD 16S rRNA gene sequencing and SOLiD shotgun sequencing
S Mitra, K Förster-Fromme, A Damms-Machado, T Scheurenbrand, ...
BMC genomics 14 (5), 1-11, 2013
Optimisation of 16S rRNA gut microbiota profiling of extremely low birth weight infants
C Alcon-Giner, S Caim, S Mitra, J Ketskemety, U Wegmann, J Wain, ...
BMC genomics 18 (1), 1-15, 2017
Ecogenomics reveals metals and land-use pressures on microbial communities in the waterways of a megacity
G Saxena, EM Marzinelli, NN Naing, Z He, Y Liang, L Tom, S Mitra, ...
Environmental science & technology 49 (3), 1462-1471, 2015
Mining and assessment of catabolic pathways in the metagenome of a common effluent treatment plant to induce the degradative capacity of biomass
RP More, S Mitra, SC Raju, A Kapley, HJ Purohit
Bioresource technology 153, 137-146, 2014
Perturbations of the gut microbiome in anti-CCP positive individuals at risk of developing rheumatoid arthritis
CM Rooney, K Mankia, S Mitra, IB Moura, P Emery, MH Wilcox
Rheumatology, 2020
Short clones or long clones? A simulation study on the use of paired reads in metagenomics
S Mitra, M Schubach, DH Huson
BMC bioinformatics 11 (1), 1-11, 2010
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