Carson Andorf
Carson Andorf
Computational Biologist, USDA-ARS
Verified email at iastate.edu
Title
Cited by
Cited by
Year
MaizeGDB update: new tools, data and interface for the maize model organism database
CM Andorf, EK Cannon, JL Portwood, JM Gardiner, LC Harper, ...
Nucleic acids research 44 (D1), D1195-D1201, 2016
1642016
MaizeGDB 2018: the maize multi-genome genetics and genomics database
JL Portwood, MR Woodhouse, EK Cannon, JM Gardiner, LC Harper, ...
Nucleic acids research 47 (D1), D1146-D1154, 2019
1272019
The maize W22 genome provides a foundation for functional genomics and transposon biology
NM Springer, SN Anderson, CM Andorf, KR Ahern, F Bai, O Barad, ...
Nature genetics 50 (9), 1282-1288, 2018
1202018
The Locus Lookup tool at MaizeGDB: identification of genomic regions in maize by integrating sequence information with physical and genetic maps
CM Andorf, CJ Lawrence, LC Harper, ML Schaeffer, DA Campbell, ...
Bioinformatics 26 (3), 434-436, 2010
942010
MaizeGDB: curation and outreach go hand-in-hand
ML Schaeffer, LC Harper, JM Gardiner, CM Andorf, DA Campbell, ...
Database 2011, 2011
872011
Maize GO annotation—methods, evaluation, and review (maize‐GAMER)
K Wimalanathan, I Friedberg, CM Andorf, CJ Lawrence‐Dill
Plant Direct 2 (4), e00052, 2018
642018
MaizeGDB becomes ‘sequence-centric’
TZ Sen, CM Andorf, ML Schaeffer, LC Harper, ME Sparks, J Duvick, ...
Database 2009, 2009
522009
Information integration and knowledge acquisition from semantically heterogeneous biological data sources
D Caragea, J Pathak, J Bao, A Silvescu, C Andorf, D Dobbs, V Honavar
International Workshop on Data Integration in the Life Sciences, 175-190, 2005
502005
Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes
MY Law, KL Childs, MS Campbell, JC Stein, AJ Olson, C Holt, N Panchy, ...
Plant physiology 167 (1), 25-39, 2015
492015
G-quadruplex (G4) motifs in the maize (Zea mays L.) genome are enriched at specific locations in thousands of genes coupled to energy status, hypoxia, low sugar, and nutrient …
CM Andorf, M Kopylov, D Dobbs, KE Koch, ME Stroupe, CJ Lawrence, ...
Journal of Genetics and Genomics 41 (12), 627-647, 2014
472014
Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach
C Andorf, D Dobbs, V Honavar
BMC bioinformatics 8 (1), 1-12, 2007
472007
Choosing a genome browser for a Model Organism Database: surveying the maize community
TZ Sen, LC Harper, ML Schaeffer, CM Andorf, TE Seigfried, DA Campbell, ...
Database 2010, 2010
442010
Technological advances in maize breeding: past, present and future
C Andorf, WD Beavis, M Hufford, S Smith, WP Suza, K Wang, ...
Theoretical and applied genetics 132 (3), 817-849, 2019
392019
Crowdsourcing image analysis for plant phenomics to generate ground truth data for machine learning
N Zhou, ZD Siegel, S Zarecor, N Lee, DA Campbell, CM Andorf, ...
PLoS computational biology 14 (7), e1006337, 2018
302018
Ontologydriven information extraction and knowledge acquisition from heterogeneous, distributed, autonomous biological data sources
V Honavar, C Andorf, D Caragea, A Silvescu, J Reinoso-Castillo, ...
Proceedings of the IJCAI-2001 Workshop on Knowledge Discovery from …, 2001
302001
Learning classifiers for assigning protein sequences to gene ontology functional families
C Andorf, A Silvescu, D Dobbs, V Honavar
Structural induction: towards automatic ontology elicitation 1001, 39, 2008
282008
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ...
Database 2018, 2018
272018
POPcorn: an online resource providing access to distributed and diverse maize project data
EKS Cannon, SM Birkett, BL Braun, S Kodavali, DM Jennewein, A Yilmaz, ...
International journal of plant genomics 2011, 2011
222011
Information integration from semantically heterogeneous biological data sources
D Caragea, J Bao, J Pathak, A Silvescu, C Andorf, D Dobbs, V Honavar
16th International Workshop on Database and Expert Systems Applications …, 2005
222005
The MaizeGDB Genome Browser tutorial: one example of database outreach to biologists via video
LC Harper, ML Schaeffer, J Thistle, JM Gardiner, CM Andorf, ...
Database 2011, 2011
202011
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