| Effect of intracellular loop 3 on intrinsic dynamics of human beta2-adrenergic receptor O Ozcan, A Uyar, P Doruker, ED Akten BMC Structural Biology 13 (29), 2013 | 40 | 2013 |
| Membrane-mediated ligand unbinding of the PK-11195 ligand from TSPO T Dixon, A Uyar, S Ferguson-Miller, A Dickson Biophysical Journal, 2020 | 38 | 2020 |
| Features of Large Hinge-Bending Conformational Transitions. Prediction of Closed Structure from Open State A Uyar, N Kantarci-Carsibasi, T Haliloglu, P Doruker Biophysical Journal 106 (12), 2656-2666, 2014 | 28 | 2014 |
| Role of Pseudoisocytidine Tautomerization in Triplex-Forming Oligonucleotides: In Silico and in Vitro Studies YD Hartono, YV Pabon-Martinez, A Uyar, J Wengel, KE Lundin, R Zain, ... ACS Omega 2 (5), 2165-2177, 2017 | 17 | 2017 |
| The elastic network model reveals a consistent picture on intrinsic functional dynamics of type II restriction endonucleases A Uyar, O Kurkcuoglu, L Nilsson, P Doruker Physical biology 8 (5), 056001, 2011 | 17 | 2011 |
| Long-Range Changes in Neurolysin Dynamics Upon Inhibitor Binding A Uyar, VT Karamyan, A Dickson Journal of chemical theory and computation 14 (1), 444-452, 2017 | 13 | 2017 |
| Identification and characterization of two structurally related dipeptides that enhance catalytic efficiency of neurolysin ST Jayaraman, JT Kocot, SH Esfahani, NJ Wangler, A Uyar, Y Mechref, ... Journal of Pharmacology and Experimental Therapeutics, 2021 | 9 | 2021 |
| Conformational dynamics of bacterial trigger factor in apo and ribosome-bound states. MT Can, Z Kurkcuoglu, G Ezeroglu, A Uyar, O Kurkcuoglu, P Doruker PloS one 12 (4), e0176262, 2017 | 8 | 2017 |
| Structural Insights into Lethal Contractural Syndrome Type 3 (LCCS3) Caused by a Missense Mutation of PIP5Kγ X Zeng, A Uyar, D Sui, N Donyapour, D Wu, A Dickson, J Hu Biochemical Journal, BCJ20180326, 2018 | 6 | 2018 |
| Rational design of thermophilic CYP119 for progesterone hydroxylation by in silico mutagenesis and docking screening EK Doğru, G Güralp, A Uyar, NB Surmeli Journal of Molecular Graphics and Modelling 118, 108323, 2023 | 4 | 2023 |
| Perturbation of ACE2 Structural Ensembles by SARS-CoV-2 Spike Protein Binding A Uyar, A Dickson JCTC, 2021 | 3 | 2021 |
| Perturbation of ACE2 structural ensembles by SARS-CoV-2 spike protein binding A Uyar, A Dickson bioRxiv, 2021 | 3 | 2021 |
| Structure-function relationship of restriction endonucleases P Doruker, O Kurkcuoglu, A Uyar, L Nilsson The Febs Journal 273, 253, 2006 | 1 | 2006 |
| How Does a Ligand Explore the Deep Channel of Neurolysin? A Conformational Dynamics Study with Wexplore and Elastic Network Modeling A Uyar, V Karamyan, A Dickson Biophysical Journal 112 (3), 355a, 2017 | | 2017 |
| Targeted conformational transitions of large and multimeric proteins by an efficient elastic network based technique Y Yesiltepe, D Findik, A Uyar, D Turgut, R Ozisik, T Haliloglu, P Doruker Protein Science 24, 226, 2015 | | 2015 |
| Structure and stability of DNA duplex upon binding of triplex-forming oligonucleotide A Villa, A Uyar, Y Xu, L Nilsson EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 44, S244-S244, 2015 | | 2015 |
| A computational study on bacterial trigger factor and ribosome dynamics MT Can, G Ezeroglu, Z Kurkcuoglu, A Uyar, O Kurkcuoglu, P Doruker EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 44, S205-S205, 2015 | | 2015 |
| Dynamical features of NF-kappa B via molecular dynamics simulations and elastic network models A Uyar, V Pande, C Mura, JA Mccammon, P Doruker, L Nilsson EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 44, S175-S175, 2015 | | 2015 |
| Targeted Conformational Transitions of Multimeric Proteins by Monte Carlo Simulations Combined with Collective Anisotropic Network Model Modes Y Yesiltepe, A Uyar, D Turgut, T Haliloglu, P Doruker, R Ozisik Biophysical Journal 108 (2), 211a, 2015 | | 2015 |
| Assessing Dynamic Features of NF-κB via Molecular Dynamics Simulations and Elastic Network Model A Uyar, V Pande, C Mura, JA McCammon, P Doruker, L Nilsson Biophysical Journal 106 (2), 252a, 2014 | | 2014 |
Turkan HalilogluBogazici UniversityVerified email at boun.edu.tr
