Oliver Ratmann
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Genomics and epidemiology of the P. 1 SARS-CoV-2 lineage in Manaus, Brazil
NR Faria, TA Mellan, C Whittaker, IM Claro, DS Candido, S Mishra, ...
Science 372 (6544), 815-821, 2021
Assessing transmissibility of SARS-CoV-2 lineage B. 1.1. 7 in England
E Volz, S Mishra, M Chand, JC Barrett, R Johnson, L Geidelberg, ...
Nature 593 (7858), 266-269, 2021
Transmission of SARS-CoV-2 Lineage B. 1.1. 7 in England: Insights from linking epidemiological and genetic data
E Volz, S Mishra, M Chand, JC Barrett, R Johnson, L Geidelberg, ...
MedRxiv, 2020.12. 30.20249034, 2021
Age groups that sustain resurging COVID-19 epidemics in the United States
M Monod, A Blenkinsop, X Xi, D Hebert, S Bershan, S Tietze, M Baguelin, ...
Science 371 (6536), eabe8372, 2021
Global minimum estimates of children affected by COVID-19-associated orphanhood and deaths of caregivers: a modelling study
SD Hillis, HJT Unwin, Y Chen, L Cluver, L Sherr, PS Goldman, ...
The Lancet 398 (10298), 391-402, 2021
COVID-19–associated orphanhood and caregiver death in the United States
SD Hillis, A Blenkinsop, A Villaveces, FB Annor, L Liburd, GM Massetti, ...
Pediatrics 148 (6), e2021053760, 2021
Model criticism based on likelihood-free inference, with an application to protein network evolution
O Ratmann, C Andrieu, C Wiuf, S Richardson
Proceedings of the National Academy of Sciences 106 (26), 10576-10581, 2009
Inference for nonlinear epidemiological models using genealogies and time series
DA Rasmussen, O Ratmann, K Koelle
PLoS computational biology 7 (8), e1002136, 2011
State-level tracking of COVID-19 in the United States
HJT Unwin, S Mishra, VC Bradley, A Gandy, TA Mellan, H Coupland, ...
Nature communications 11 (1), 6189, 2020
Improved algorithmic complexity for the 3SEQ recombination detection algorithm
HM Lam, O Ratmann, MF Boni
Molecular biology and evolution 35 (1), 247-251, 2018
PHYLOSCANNER: inferring transmission from within-and between-host pathogen genetic diversity
C Wymant, M Hall, O Ratmann, D Bonsall, T Golubchik, M de Cesare, ...
Molecular biology and evolution 35 (3), 719-733, 2018
Using likelihood-free inference to compare evolutionary dynamics of the protein networks of H. pylori and P. falciparum
O Ratmann, O Jørgensen, T Hinkley, M Stumpf, S Richardson, C Wiuf
PLoS Computational Biology 3 (11), e230, 2007
Report 21: Estimating COVID-19 cases and reproduction number in Brazil
TA Mellan, HH Hoeltgebaum, S Mishra, C Whittaker, RP Schnekenberg, ...
Sources of HIV infection among men having sex with men and implications for prevention
O Ratmann, A Van Sighem, D Bezemer, A Gavryushkina, S Jurriaans, ...
Science translational medicine 8 (320), 320ra2-320ra2, 2016
Changing composition of SARS-CoV-2 lineages and rise of Delta variant in England
S Mishra, S Mindermann, M Sharma, C Whittaker, TA Mellan, T Wilton, ...
EClinicalMedicine 39, 2021
Cultural conformity generates extremely stable traditions in bird song
RF Lachlan, O Ratmann, S Nowicki
Nature communications 9 (1), 2417, 2018
Global, regional, and national minimum estimates of children affected by COVID-19-associated orphanhood and caregiver death, by age and family circumstance up to Oct 31, 2021 …
HJT Unwin, S Hillis, L Cluver, S Flaxman, PS Goldman, A Butchart, ...
The Lancet Child & Adolescent Health 6 (4), 249-259, 2022
Is the cure really worse than the disease? The health impacts of lockdowns during COVID-19
G Meyerowitz-Katz, S Bhatt, O Ratmann, JM Brauner, S Flaxman, ...
BMJ global health 6 (8), e006653, 2021
Impact of cross-protective vaccines on epidemiological and evolutionary dynamics of influenza
N Arinaminpathy, O Ratmann, K Koelle, SL Epstein, GE Price, C Viboud, ...
Proceedings of the National Academy of Sciences 109 (8), 3173-3177, 2012
Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver
C Wymant, F Blanquart, T Golubchik, A Gall, M Bakker, D Bezemer, ...
Virus evolution 4 (1), vey007, 2018
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