High Resolution Cryo-EM Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing A Mentes, A Huehn, X Liu, A Zwolak, R Dominguez, H Shuman, EM Ostap, ... Biophysical Journal 114 (3), 319a, 2018 | 139 | 2018 |
Asynchronous replica exchange software for grid and heterogeneous computing E Gallicchio, J Xia, WF Flynn, B Zhang, S Samlalsingh, A Mentes, ... Computer physics communications 196, 236-246, 2015 | 40 | 2015 |
The Q61H mutation decouples KRAS from upstream regulation and renders cancer cells resistant to SHP2 inhibitors T Gebregiworgis, Y Kano, J St-Germain, N Radulovich, ML Udaskin, ... Nature communications 12 (1), 6274, 2021 | 28 | 2021 |
Parameterization of an effective potential for protein–ligand binding from host–guest affinity data L Wickstrom, N Deng, P He, A Mentes, C Nguyen, MK Gilson, T Kurtzman, ... Journal of Molecular Recognition 29 (1), 10-21, 2016 | 28 | 2016 |
Large scale free energy calculations for blind predictions of protein–ligand binding: the D3R Grand Challenge 2015 N Deng, WF Flynn, J Xia, RSK Vijayan, B Zhang, P He, A Mentes, ... Journal of computer-aided molecular design 30, 743-751, 2016 | 20 | 2016 |
Binding energy distribution analysis method: Hamiltonian replica exchange with torsional flattening for binding mode prediction and binding free energy estimation A Mentes, NJ Deng, RSK Vijayan, J Xia, E Gallicchio, RM Levy Journal of chemical theory and computation 12 (5), 2459-2470, 2016 | 14 | 2016 |
Free-energy landscape and characteristic forces for the initiation of DNA unzipping A Mentes, AM Florescu, E Brunk, J Wereszczynski, M Joyeux, ... Biophysical journal 108 (7), 1727-1738, 2015 | 12 | 2015 |
Computational and Functional Analyses of HER2 Mutations Reveal Allosteric Activation Mechanisms and Altered Pharmacologic Effects N Ishiyama, M O'Connor, A Salomatov, D Romashko, S Thakur, A Mentes, ... Cancer Research 83 (9), 1531-1542, 2023 | 4 | 2023 |
35MO Discovery and characterization of selective, FGFR1-sparing, inhibitors of FGFR2/3 oncogenic mutations for the treatment of cancers E Dardenne, F Padilla, S Rasmussen, SN Yang, A Mentes, LS Ogawa, ... Annals of Oncology 32, S15, 2021 | 2 | 2021 |
Normal Modes for Dynamic Motions of a Topoisomerase II enzyme upon DNA-Binding and Bending A Mentes University of California, Irvine, 2013 | 1 | 2013 |
State Dependent Dynamic Coupling in Myo1B During the Force Sensitive Transition and MgADP Release A Mentes, H Shuman, EM Ostap Biophysical Journal 116 (3), 260a, 2019 | | 2019 |
Molecular Dynamics and Normal Mode Analysis of Myo1b and Myo1b Deletion Constructs Reveal Coupling between the Lever Arm Helix, N-Terminus, and Active Site A Mentes, H Shuman, EM Ostap Biophysical Journal 112 (3), 265a-266a, 2017 | | 2017 |
Large scale studies of molecular binding processes on computational grids and heterogeneous hardware resources E Gallicchio, B Zhang, D Kilburg, RK Pal, H Tancredi, J Xia, WF Flynn, ... ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 251, 2016 | | 2016 |
Supplementary material for: Free Energy Landscape and Characteristic Forces for the Initiation of DNA Unzipping A Mentes, AM Florescu, E Brunk, J Wereszczynski, M Joyeux, ... | | 2015 |
Detailed Conformational Changes Involved in TopoII DNA Binding, Bending and Cleavage A Mentes Biophysical Journal 104 (2), 69a, 2013 | | 2013 |
Molecular dynamic simulations of nucleic acids and a DNA/type II topoisomerase nucleo-protein complex A Mentes University of California, Irvine, 2013 | | 2013 |
Structural and Energetic Details of the DNA-Binding and Cleavage Core of Saccharomyces Cerevisiae Topoisomerases II Linked to DNA through its Active Site Tyrosine A Mentes, E Kim, I Andricioaei Biophysical Journal 102 (3), 447a, 2012 | | 2012 |
Tuesday, February 28, 2012 447a A Mentes, E Kim, I Andricioaei | | |
Parameterization of an effective potential for protein–ligand binding from host–guest affinity data N Deng, P He, A Mentes, RM Levy | | |