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Shira Weingarten-Gabbay
Shira Weingarten-Gabbay
Postdoctoral Fellow, Harvard University and The Broad Institute of MIT and Harvard
Verified email at broadinstitute.org
Title
Cited by
Cited by
Year
The coding capacity of SARS-CoV-2
Y Finkel, O Mizrahi, A Nachshon, S Weingarten-Gabbay, D Morgenstern, ...
Nature 589 (7840), 125-130, 2021
3422021
Systematic discovery of cap-independent translation sequences in human and viral genomes
S Weingarten-Gabbay, S Elias-Kirma, R Nir, AA Gritsenko, ...
Science 351 (6270), aad4939, 2016
2882016
The grammar of transcriptional regulation
S Weingarten-Gabbay, E Segal
Human genetics 133 (6), 701-711, 2014
1072014
Noise in gene expression is coupled to growth rate
L Keren, D Van Dijk, S Weingarten-Gabbay, D Davidi, G Jona, ...
Genome Research 25 (12), 1893-1902, 2015
752015
The translation initiation factor DAP5 promotes IRES-driven translation of p53 mRNA
S Weingarten-Gabbay, D Khan, N Liberman, Y Yoffe, S Bialik, S Das, ...
Oncogene 33 (5), 611-618, 2014
742014
Systematic interrogation of human promoters
S Weingarten-Gabbay, R Nir, S Lubliner, E Sharon, Y Kalma, ...
Genome research 29 (2), 171-183, 2019
652019
Unraveling the determinants of microRNA mediated regulation using a massively parallel reporter assay
I Vainberg Slutskin, S Weingarten-Gabbay, R Nir, A Weinberger, E Segal
Nature communications 9 (1), 1-18, 2018
352018
Profiling SARS-CoV-2 HLA-I peptidome reveals T cell epitopes from out-of-frame ORFs
S Weingarten-Gabbay, S Klaeger, S Sarkizova, LR Pearlman, DY Chen, ...
Cell 184 (15), 3962-3980. e17, 2021
332021
Structured elements drive extensive circular RNA translation
CK Chen, R Cheng, J Demeter, J Chen, S Weingarten-Gabbay, L Jiang, ...
Molecular cell 81 (20), 4300-4318. e13, 2021
312021
Sequence features of viral and human Internal Ribosome Entry Sites predictive of their activity
AA Gritsenko, S Weingarten-Gabbay, S Elias-Kirma, R Nir, D De Ridder, ...
PLoS computational biology 13 (9), e1005734, 2017
262017
A shared architecture for promoters and enhancers
S Weingarten-Gabbay, E Segal
Nature genetics 46 (12), 1253-1254, 2014
212014
SARS-CoV-2 infected cells present HLA-I peptides from canonical and out-of-frame ORFs
S Weingarten-Gabbay, S Klaeger, S Sarkizova, LR Pearlman, DY Chen, ...
bioRxiv, 2020
192020
Toward a systematic understanding of translational regulatory elements in human and viruses
S Weingarten-Gabbay, E Segal
RNA biology 13 (10), 927-933, 2016
72016
MS-based HLA-II peptidomics combined with multiomics will aid the development of future immunotherapies
HB Taylor, S Klaeger, KR Clauser, S Sarkizova, S Weingarten-Gabbay, ...
Molecular & Cellular Proteomics 20, 2021
32021
Deciphering transcriptional regulation of human core promoters
S Weingarten-Gabbay, R Nir, S Lubliner, E Sharon, Y Kalma, ...
bioRxiv, 174904, 2017
32017
Immunogenic compositions and use thereof
P Sabeti, S Weingarten-Gabbay, S Klaeger, J Abelin, M Saeed, ...
US Patent App. 17/463,429, 2022
2022
Unraveling the regulatory code of transcription and translation in the human genome and viruses
S Weingarten-Gabbay
PQDT-Global, 2018
2018
DECIPHERING SEQUENCE FEATURES OF INTERNAL RIBOSOME ENTRY SITES
AA GRITSENKO, S WEINGARTEN-GABBAY, S ELIAS-KIRMA, NIR Ronit, ...
DATA-DRIVEN MODELLING OF PROTEIN SYNTHESIS, 121, 0
Reviewer Index 1941
C Cayrou, B Ballester, I Peiffer, R Fenouil, P Coulombe, JC Andrau, ...
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