Jan K. Marzinek
Jan K. Marzinek
Bioinformatics Institute (A*STAR)
Verified email at - Homepage
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The antibiotic darobactin mimics a β-strand to inhibit outer membrane insertase
H Kaur, RP Jakob, JK Marzinek, R Green, Y Imai, JR Bolla, E Agustoni, ...
Nature 593 (7857), 125-129, 2021
The architecture of the OmpC–MlaA complex sheds light on the maintenance of outer membrane lipid asymmetry in Escherichia coli
J Yeow, KW Tan, DA Holdbrook, ZS Chong, JK Marzinek, PJ Bond, ...
Journal of Biological Chemistry 293 (29), 11325-11340, 2018
South-east Asian Zika virus strain linked to cluster of cases in Singapore, August 2016
S Maurer-Stroh, TM Mak, YK Ng, SP Phuah, RG Huber, JK Marzinek, ...
Eurosurveillance 21 (38), 30347, 2016
Pushing the envelope: dengue viral membrane coaxed into shape by molecular simulations
JK Marzinek, DA Holdbrook, RG Huber, C Verma, PJ Bond
Structure 24 (8), 1410-1420, 2016
Mechanism of enhanced immature dengue virus attachment to endosomal membrane induced by prM antibody
M Wirawan, G Fibriansah, JK Marzinek, XX Lim, TS Ng, AYL Sim, ...
Structure 27 (2), 253-267. e8, 2019
A T164S mutation in the dengue virus NS1 protein is associated with greater disease severity in mice
KWK Chan, S Watanabe, JY Jin, J Pompon, D Teng, S Alonso, ...
Science translational medicine 11 (498), eaat7726, 2019
The disordered plant dehydrin Lti30 protects the membrane during water-related stress by cross-linking lipids
A Gupta, JK Marzinek, D Jefferies, PJ Bond, P Harryson, T Wohland
Journal of Biological Chemistry 294 (16), 6468-6482, 2019
Multiscale molecular dynamics simulation approaches to the structure and dynamics of viruses
RG Huber, JK Marzinek, DA Holdbrook, PJ Bond
Progress in Biophysics and Molecular Biology 128, 121-132, 2017
Extending the Martini Coarse-Grained Force Field to N-Glycans
AT Shivgan, JK Marzinek, RG Huber, A Krah, RH Henchman, ...
Journal of Chemical Information and Modeling 60 (8), 3864-3883, 2020
A thermodynamic funnel drives bacterial lipopolysaccharide transfer in the TLR4 pathway
RG Huber, NA Berglund, V Kargas, JK Marzinek, DA Holdbrook, S Khalid, ...
Structure 26 (8), 1151-1161. e4, 2018
Uncovering cryptic pockets in the SARS-CoV-2 spike glycoprotein
L Zuzic, F Samsudin, AT Shivgan, PV Raghuvamsi, JK Marzinek, A Boags, ...
Structure 30 (8), 1062-1074. e4, 2022
Infectivity of dengue virus serotypes 1 and 2 is correlated with E-protein intrinsic dynamics but not to envelope conformations
KK Sharma, XX Lim, SN Tantirimudalige, A Gupta, JK Marzinek, ...
Structure 27 (4), 618-630. e4, 2019
Multiscale modelling and simulation of viruses
JK Marzinek, RG Huber, PJ Bond
Current opinion in structural biology 61, 146-152, 2020
Molecular basis of dengue virus serotype 2 morphological switch from 29 C to 37 C
XN Lim, C Shan, JK Marzinek, H Dong, TS Ng, JSG Ooi, G Fibriansah, ...
PLoS pathogens 15 (9), e1007996, 2019
Free energy predictions of ligand binding to an α-helix using steered molecular dynamics and umbrella sampling simulations
JK Marzinek, PJ Bond, G Lian, Y Zhao, L Han, MG Noro, EN Pistikopoulos, ...
Journal of Chemical Information and Modeling 54 (7), 2093-2104, 2014
Partial intrinsic disorder governs the dengue capsid protein conformational ensemble
PLS Boon, WG Saw, XX Lim, PV Raghuvamsi, RG Huber, JK Marzinek, ...
ACS chemical biology 13 (6), 1621-1630, 2018
Characterizing the conformational landscape of flavivirus fusion peptides via simulation and experiment
JK Marzinek, R Lakshminarayanan, E Goh, RG Huber, S Panzade, ...
Scientific reports 6 (1), 19160, 2016
Multiscale modeling of innate immune receptors: endotoxin recognition and regulation by host defense peptides
DA Holdbrook, RG Huber, JK Marzinek, A Stubbusch, A Schmidtchen, ...
Pharmacological Research 147, 104372, 2019
Molecular Dynamics Simulations of Bacterial Outer Membrane Lipid Extraction: Adequate Sampling?
J Shearer, JK Marzinek, PJ Bond, S Khalid
The Journal of Chemical Physics 153 (4), 044122, 2020
A polar SxxS motif drives assembly of the transmembrane domains of Toll-like receptor 4
V Kargas, JK Marzinek, DA Holdbrook, H Yin, RC Ford, PJ Bond
Biochimica et Biophysica Acta (BBA)-Biomembranes 1859 (10), 2086-2095, 2017
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