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Erin K. Molloy
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The effect of scan length on the reliability of resting-state fMRI connectivity estimates
RM Birn, EK Molloy, R Patriat, T Parker, TB Meier, GR Kirk, VA Nair, ...
NeuroImage 83, 550-558, 2013
8352013
Developmental pathways to amygdala-prefrontal function and internalizing symptoms in adolescence
CA Burghy, DE Stodola, PL Ruttle, EK Molloy, JM Armstrong, JA Oler, ...
Nature neuroscience 15 (12), 1736-1741, 2012
4552012
The effect of resting condition on resting-state fMRI reliability and consistency: a comparison between resting with eyes open, closed, and fixated
R Patriat, EK Molloy, TB Meier, GR Kirk, VA Nair, ME Meyerand, ...
NeuroImage 78, 463-473, 2013
4172013
To include or not to include: The Impact of Gene Filtering on Species Tree Estimation Methods
EK Molloy, T Warnow
Systematic Biology, 2017
2032017
ASTRAL-Pro: Quartet-Based Species-Tree Inference despite Paralogy
C Zhang, C Scornavacca, EK Molloy, S Mirarab
Molecular Biology and Evolution 37 (11), 3292-3307, 2020
1532020
The Influence of Physiological Noise Correction on Test–Retest Reliability of Resting-State Functional Connectivity
RM Birn, MD Cornejo, EK Molloy, R Patriat, TB Meier, GR Kirk, VA Nair, ...
Brain connectivity 4 (7), 511-522, 2014
992014
The performance of coalescent-based species tree estimation methods under models of missing data
M Nute, J Chou, EK Molloy, T Warnow
BMC genomics 19 (5), 286, 2018
762018
The influence of spatial resolution and smoothing on the detectability of resting-state and task fMRI
EK Molloy, ME Meyerand, RM Birn
NeuroImage 86, 221-230, 2014
652014
Polynomial-Time Statistical Estimation of Species Trees Under Gene Duplication and Loss
B Legried, EK Molloy, T Warnow, S Roch
Journal of Computational Biology, 2020
392020
FastMulRFS: fast and accurate species tree estimation under generic gene duplication and loss models
EK Molloy, T Warnow
Bioinformatics 36 (Supplement_1), i57-i65, 2020
392020
ILS-Aware Analysis of Low-Homoplasy Retroelement Insertions: Inference of Species Trees and Introgression Using Quartets
MS Springer, EK Molloy, DB Sloan, MP Simmons, J Gatesy
Journal of Heredity 111 (2), 147-168, 2020
322020
Using Edge Voxel Information to Improve Motion Regression for rs-fMRI Connectivity Studies
R Patriat, EK Molloy, RM Birn
Brain connectivity 5 (9), 582-595, 2015
282015
Statistically consistent divide-and-conquer pipelines for phylogeny estimation using NJMerge
EK Molloy, T Warnow
Algorithms for Molecular Biology 14, 14, 2019
252019
TIPP2: metagenomic taxonomic profiling using phylogenetic markers
N Shah, EK Molloy, M Pop, T Warnow
Bioinformatics 37 (13), 1839-1845, 2021
242021
Advancing admixture graph estimation via maximum likelihood network orientation
EK Molloy, A Durvasula, S Sankararaman
Bioinformatics 37 (Supplement_1), i142-i150, 2021
242021
NJMerge: a generic technique for scaling phylogeny estimation methods and its application to species trees
EK Molloy, T Warnow
Comparative Genomics: 16th International Conference, RECOMB-CG 2018, Magog …, 2018
232018
TreeMerge: a new method for improving the scalability of species tree estimation methods
EK Molloy, T Warnow
Bioinformatics 35 (14), i417-i426, 2019
222019
Inferring population structure in biobank-scale genomic data
AM Chiu, EK Molloy, Z Tan, A Talwalkar, S Sankararaman
The American Journal of Human Genetics 109 (4), 727-737, 2022
182022
OCTAL: Optimal Completion of gene trees in polynomial time
S Christensen, EK Molloy, P Vachaspati, T Warnow
Algorithms for molecular biology 13, 1-18, 2018
182018
Theoretical and practical considerations when using retroelement insertions to estimate species trees in the anomaly zone
EK Molloy, J Gatesy, MS Springer
Systematic Biology 71 (3), 721-740, 2022
112022
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Articles 1–20