William S. Hlavacek
William S. Hlavacek
Theoretical Division, Los Alamos National Laboratory
Verified email at lanl.gov - Homepage
Title
Cited by
Cited by
Year
Rule-based modeling of biochemical systems with BioNetGen
JR Faeder, ML Blinov, WS Hlavacek
Methods Mol Biol 500, 113-167, 2009
4582009
BioNetGen: software for rule-based modeling of signal transduction based on the interactions of molecular domains
ML Blinov, JR Faeder, B Goldstein, WS Hlavacek
Bioinformatics 20 (17), 3289-3291, 2004
4382004
Rules for modeling signal-transduction systems
WS Hlavacek, JR Faeder, ML Blinov, RG Posner, M Hucka, W Fontana
Science's STKE 2006 (344), re6-re6, 2006
4142006
Design of gene circuits: lessons from bacteria
ME Wall, WS Hlavacek, MA Savageau
Nature Reviews Genetics 5 (1), 34-42, 2004
2522004
Mathematical and computational models of immune-receptor signalling
B Goldstein, JR Faeder, WS Hlavacek
Nature Reviews Immunology 4 (6), 445-456, 2004
2342004
The complexity of complexes in signal transduction
WS Hlavacek, JR Faeder, ML Blinov, AS Perelson, B Goldstein
Biotechnology and bioengineering 84 (7), 783-794, 2003
2322003
Investigation of early events in FcεRI-mediated signaling using a detailed mathematical model
JR Faeder, WS Hlavacek, I Reischl, ML Blinov, H Metzger, A Redondo, ...
The Journal of Immunology 170 (7), 3769-3781, 2003
1882003
A network model of early events in epidermal growth factor receptor signaling that accounts for combinatorial complexity
ML Blinov, JR Faeder, B Goldstein, WS Hlavacek
Biosystems 83 (2-3), 136-151, 2006
1852006
Rule‐based modeling of biochemical networks
JR Faeder, ML Blinov, B Goldstein, WS Hlavacek
Complexity 10 (4), 22-41, 2005
1532005
Rules for coupled expression of regulator and effector genes in inducible circuits
WS Hlavacek, MA Savageau
Journal of molecular biology 255 (1), 121-139, 1996
1411996
Kinetic Monte Carlo method for rule-based modeling of biochemical networks
J Yang, MI Monine, JR Faeder, WS Hlavacek
Physical Review E 78 (3), 031910, 2008
1342008
Steric effects on multivalent ligand-receptor binding: exclusion of ligand sites by bound cell surface receptors
WS Hlavacek, RG Posner, AS Perelson
Biophysical Journal 76 (6), 3031-3043, 1999
1211999
Rule‐based modeling: a computational approach for studying biomolecular site dynamics in cell signaling systems
LA Chylek, LA Harris, CS Tung, JR Faeder, CF Lopez, WS Hlavacek
Wiley Interdisciplinary Reviews: Systems Biology and Medicine 6 (1), 13-36, 2014
1202014
Graph theory for rule-based modeling of biochemical networks
ML Blinov, J Yang, JR Faeder, WS Hlavacek
Lect Notes Comput Sci 4230, 89-106, 2006
942006
Influence of follicular dendritic cells on decay of HIV during antiretroviral therapy
WS Hlavacek, NI Stilianakis, DW Notermans, SA Danner, AS Perelson
Proceedings of the National Academy of Sciences 97 (20), 10966-10971, 2000
872000
Stochastic effects and bistability in T cell receptor signaling
T Lipniacki, B Hat, JR Faeder, WS Hlavacek
Journal of theoretical Biology 254 (1), 110-122, 2008
852008
Multiple functions of a feed-forward-loop gene circuit
ME Wall, MJ Dunlop, WS Hlavacek
Journal of molecular biology 349 (3), 501-514, 2005
842005
Dissociation of HIV-1 from follicular dendritic cells during HAART: mathematical analysis
WS Hlavacek, C Wofsy, AS Perelson
Proceedings of the National Academy of Sciences 96 (26), 14681-14686, 1999
801999
Mitochondrial morphological features are associated with fission and fusion events
LM Westrate, JA Drocco, KR Martin, WS Hlavacek, JP MacKeigan
PloS one 9 (4), e95265, 2014
722014
Combinatorial complexity and dynamical restriction of network flows in signal transduction
JR Faeder, ML Blinov, B Goldstein, WS Hlavacek
Systems Biology 2 (1), 5-15, 2005
722005
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