Bernd Fischer
Bernd Fischer
DKFZ - German Cancer Research Center
Verified email at - Homepage
Cited by
Cited by
A cross-platform toolkit for mass spectrometry and proteomics
MC Chambers, B Maclean, R Burke, D Amodei, DL Ruderman, ...
Nature Biotechnology 30 (10), 918-920, 2012
Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins
A Castello, B Fischer, K Eichelbaum, R Horos, BM Beckmann, C Strein, ...
Cell 149 (6), 1393–1406, 2012
The RNA-binding protein repertoire of embryonic stem cells
SC Kwon, H Yi, K Eichelbaum, S Föhr, B Fischer, KT You, A Castello, ...
Nature structural & molecular biology 20 (9), 1122-1130, 2013
Comprehensive identification of RNA-binding domains in human cells
A Castello, B Fischer, CK Frese, R Horos, AM Alleaume, S Foehr, T Curk, ...
Molecular Cell 63 (4), 696-710, 2016
CellCognition: time-resolved phenotype annotation in high-throughput live cell imaging
M Held, MHA Schmitz, B Fischer, T Walter, B Neumann, MH Olma, ...
Nature methods 7 (9), 747-754, 2010
The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs
BM Beckmann, R Horos, B Fischer, A Castello, K Eichelbaum, ...
Nature Communications 6, 2015
Path-based clustering for grouping of smooth curves and texture segmentation
B Fischer, JM Buhmann
IEEE Transactions on Pattern Analysis and Machine Intelligence 25 (4), 513-518, 2003
Bagging for path-based clustering
B Fischer, JM Buhmann
IEEE Transactions on Pattern Analysis and Machine Intelligence 25 (11), 1411 …, 2003
SomaticSignatures: inferring mutational signatures from single-nucleotide variants
JS Gehring, B Fischer, M Lawrence, W Huber
Bioinformatics 31 (22), 3673-3675, 2015
A fast SEQUEST cross correlation algorithm
JK Eng, B Fischer, J Grossmann, MJ MacCoss
Journal of proteome research 7 (10), 4598-4602, 2008
The group-lasso for generalized linear models: uniqueness of solutions and efficient algorithms
V Roth, B Fischer
Proceedings of the 25th international conference on Machine learning, 848-855, 2008
RNA-binding proteins in Mendelian disease
A Castello, B Fischer, MW Hentze, T Preiss
Trends in Genetics 29 (5), 318-327, 2013
NovoHMM: a hidden Markov model for de novo peptide sequencing
B Fischer, V Roth, F Roos, J Grossmann, S Baginsky, P Widmayer, ...
Analytical chemistry 77 (22), 7265-7273, 2005
Mapping of signaling networks through synthetic genetic interaction analysis by RNAi
T Horn, T Sandmann, B Fischer, E Axelsson, W Huber, M Boutros
Nature methods 8 (4), 341-346, 2011
System-wide identification of RNA-binding proteins by interactome capture
A Castello, R Horos, C Strein, B Fischer, K Eichelbaum, LM Steinmetz, ...
Nature protocols 8 (3), 491-500, 2013
Protein quality control at the inner nuclear membrane
A Khmelinskii, E Blaszczak, M Pantazopoulou, B Fischer, DJ Omnus, ...
Nature 516 (7531), 410-413, 2014
Dengue Virus Perturbs Mitochondrial Morphodynamics to Dampen Innate Immune Responses
L Chatel-Chaix, M Cortese, I Romero-Brey, S Bender, CJ Neufeldt, ...
Cell Host & Microbe 20 (3), 342-356, 2016
Mapping genetic interactions in human cancer cells with RNAi and multiparametric phenotyping
C Laufer, B Fischer, M Billmann, W Huber, M Boutros
Nature methods 10 (5), 427-431, 2013
Clustering with the connectivity kernel
B Fischer, V Roth, JM Buhmann
Advances in Neural Information Processing Systems 16, 89-96, 2004
Global changes of the RNA-bound proteome during the maternal-to-zygotic transition in Drosophila
VO Sysoev, B Fischer, CK Frese, I Gupta, J Krijgsveld, MW Hentze, ...
Nature Communications 7, 2016
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