Dong-Yup Lee
Dong-Yup Lee
Associate Professor, School of Chemical Engineering, Sungkyunkwan University
Verified email at skku.edu
TitleCited byYear
Systems biotechnology for strain improvement
SY Lee, DY Lee, TY Kim
Trends in biotechnology 23 (7), 349-358, 2005
3602005
Metabolic engineering of Escherichia coli for enhanced production of succinic acid, based on genome comparison and in silico gene knockout simulation
SJ Lee, DY Lee, TY Kim, BH Kim, J Lee, SY Lee
Appl. Environ. Microbiol. 71 (12), 7880-7887, 2005
2982005
Combined in silico modeling and metabolomics analysis to characterize fed‐batch CHO cell culture
S Selvarasu, YS Ho, WPK Chong, NSC Wong, FNK Yusufi, YY Lee, ...
Biotechnology and bioengineering 109 (6), 1415-1429, 2012
1702012
Recon 2.2: from reconstruction to model of human metabolism
N Swainston, K Smallbone, H Hefzi, PD Dobson, J Brewer, M Hanscho, ...
Metabolomics 12 (7), 109, 2016
1412016
MetaFluxNet: the management of metabolic reaction information and quantitative metabolic flux analysis
DY Lee, H Yun, S Park, SY Lee
Bioinformatics 19 (16), 2144-2146, 2003
1302003
Genome-scale metabolic reconstruction and in silico analysis of methylotrophic yeast Pichia pastoris for strain improvement
BKS Chung, S Selvarasu, A Camattari, J Ryu, H Lee, J Ahn, H Lee, ...
Microbial cell factories 9 (1), 50, 2010
1252010
Metabolite essentiality elucidates robustness of Escherichia coli metabolism
PJ Kim, DY Lee, TY Kim, KH Lee, H Jeong, SY Lee, S Park
Proceedings of the National Academy of Sciences 104 (34), 13638-13642, 2007
1182007
Synthetic fusion protein design and applications
K Yu, C Liu, BG Kim, DY Lee
Biotechnology advances 33 (1), 155-164, 2015
982015
A Consensus Genome-scale Reconstruction of Chinese Hamster Ovary Cell Metabolism
H Hefzi, KS Ang, M Hanscho, A Bordbar, D Ruckerbauer, M Lakshmanan, ...
Cell Systems 3 (5), 434-443. e8, 2016
882016
Software applications for flux balance analysis
M Lakshmanan, G Koh, BKS Chung, DY Lee
Briefings in bioinformatics 15 (1), 108-122, 2014
832014
Metabolomics-driven approach for the improvement of Chinese hamster ovary cell growth: overexpression of malate dehydrogenase II
WPK Chong, SG Reddy, FNK Yusufi, DY Lee, NSC Wong, CK Heng, ...
Journal of biotechnology 147 (2), 116-121, 2010
802010
Genome‐scale modeling and in silico analysis of ethanologenic bacteria Zymomonas mobilis
H Widiastuti, JY Kim, S Selvarasu, IA Karimi, H Kim, JS Seo, DY Lee
Biotechnology and bioengineering 108 (3), 655-665, 2011
732011
Metabolomics profiling of extracellular metabolites in recombinant Chinese Hamster Ovary fed‐batch culture
WPK Chong, LT Goh, SG Reddy, FNK Yusufi, DY Lee, NSC Wong, ...
Rapid Communications in Mass Spectrometry 23 (23), 3763-3771, 2009
712009
Genome-scale modeling and in silico analysis of mouse cell metabolic network
S Selvarasu, IA Karimi, GH Ghim, DY Lee
Molecular BioSystems 6 (1), 152-161, 2009
712009
LC‐MS‐based metabolic characterization of high monoclonal antibody‐producing Chinese hamster ovary cells
WPK Chong, SH Thng, AP Hiu, DY Lee, ECY Chan, YS Ho
Biotechnology and bioengineering 109 (12), 3103-3111, 2012
702012
Colored Petri net modeling and simulation of signal transduction pathways
DY Lee, R Zimmer, SY Lee, S Park
Metabolic Engineering 8 (2), 112-122, 2006
692006
N-Glycosylation design and control of therapeutic monoclonal antibodies
S Sha, C Agarabi, K Brorson, DY Lee, S Yoon
Trends in biotechnology 34 (10), 835-846, 2016
682016
Computational codon optimization of synthetic gene for protein expression
BKS Chung, DY Lee
BMC systems biology 6 (1), 134, 2012
622012
Codon Optimization OnLine (COOL): a web-based multi-objective optimization platform for synthetic gene design
JX Chin, BKS Chung, DY Lee
Bioinformatics 30 (15), 2210-2212, 2014
612014
Flux-sum analysis: a metabolite-centric approach for understanding the metabolic network
BKS Chung, DY Lee
BMC systems biology 3 (1), 117, 2009
612009
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Articles 1–20