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Ivana Mihalek
Ivana Mihalek
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Year
A family of evolution–entropy hybrid methods for ranking protein residues by importance
I Mihalek, I Reš, O Lichtarge
Journal of molecular biology 336 (5), 1265-1282, 2004
3372004
An accurate, sensitive, and scalable method to identify functional sites in protein structures
H Yao, DM Kristensen, I Mihalek, ME Sowa, C Shaw, M Kimmel, L Kavraki, ...
Journal of molecular biology 326 (1), 255-261, 2003
2442003
WLS-dependent secretion of WNT3A requires Ser209 acylation and vacuolar acidification
GS Coombs, J Yu, CA Canning, CA Veltri, TM Covey, JK Cheong, ...
Journal of cell science 123 (19), 3357-3367, 2010
2102010
An evolution based classifier for prediction of protein interfaces without using protein structures
I Reš, I Mihalek, O Lichtarge
Bioinformatics 21 (10), 2496-2501, 2005
1322005
Distinct faces of the Ku heterodimer mediate DNA repair and telomeric functions
A Ribes-Zamora, I Mihalek, O Lichtarge, AA Bertuch
Nature structural & molecular biology 14 (4), 301-307, 2007
1232007
TRF2 interaction with Ku heterotetramerization interface gives insight into c-NHEJ prevention at human telomeres
A Ribes-Zamora, SM Indiviglio, I Mihalek, CL Williams, AA Bertuch
Cell reports 5 (1), 194-206, 2013
972013
Evolutionary trace report_maker: a new type of service for comparative analysis of proteins
I Mihalek, I Reš, O Lichtarge
Bioinformatics 22 (13), 1656-1657, 2006
732006
Spectrum of neurodevelopmental disease associated with the GNAO1 guanosine triphosphate–binding region
MK Kelly, M Park, I Mihalek, A Rochtus, M Gramm, E Pérez‐Palma, ...
Epilepsia 60 (3), 406-418, 2019
602019
Accurate and scalable identification of functional sites by evolutionary tracing
O Lichtarge, H Yao, DM Kristensen, S Madabushi, I Mihalek
Journal of Structural and Functional Genomics 4, 159-166, 2003
552003
Mutations in RIT1 cause Noonan syndrome – additional functional evidence and expanding the clinical phenotype
M Koenighofer, CY Hung, JL McCauley, J Dallman, EJ Back, I Mihalek, ...
Clinical genetics 89 (3), 359-366, 2016
532016
Defining the Phenotype in Congenital Disorder of Glycosylation Due to ALG1 Mutations
E Morava, J Vodopiutz, DJ Lefeber, AR Janecke, WM Schmidt, S Lechner, ...
Pediatrics 130 (4), e1034-e1039, 2012
522012
Combining inference from evolution and geometric probability in protein structure evaluation
I Mihalek, I Reš, H Yao, O Lichtarge
Journal of molecular biology 331 (1), 263-279, 2003
492003
Cancer-associated mutations in the ribosomal protein L5 gene dysregulate the HDM2/p53-mediated ribosome biogenesis checkpoint
I Oršolić, S Bursać, D Jurada, I Drmić Hofman, Z Dembić, J Bartek, ...
Oncogene 39 (17), 3443-3457, 2020
382020
Active site coupling in PDE: PKA complexes promotes resetting of mammalian cAMP signaling
S Krishnamurthy, BS Moorthy, LX Xiang, LX Shan, K Bharatham, ...
Biophysical journal 107 (6), 1426-1440, 2014
372014
Helix straightening as an activation mechanism in the gelsolin superfamily of actin regulatory proteins
H Wang, S Chumnarnsilpa, A Loonchanta, Q Li, YM Kuan, S Robine, ...
Journal of biological chemistry 284 (32), 21265-21269, 2009
302009
The C-terminal extension unique to the long isoform of the shelterin component TIN2 enhances its interaction with TRF2 in a phosphorylation-and dyskeratosis congenita cluster …
ND Nelson, LM Dodson, L Escudero, AT Sukumar, CL Williams, I Mihalek, ...
Molecular and cellular biology 38 (12), e00025-18, 2018
252018
Manifestation of hawkinsinuria in a patient compound heterozygous for hawkinsinuria and tyrosinemia III
I Mihalek, O Lichtarge, A Jalan, J Vodopiutz, A Muhl, OA Bodamer
Molecular genetics and metabolism 91 (4), 379-383, 2007
232007
A structure and evolution-guided Monte Carlo sequence selection strategy for multiple alignment-based analysis of proteins
I Mihalek, I Reš, O Lichtarge
Bioinformatics 22 (2), 149-156, 2006
232006
deconSTRUCT: general purpose protein database search on the substructure level
ZH Zhang, K Bharatham, WA Sherman, I Mihalek
Nucleic acids research 38 (suppl_2), W590-W594, 2010
222010
On itinerant water molecules and detectability of protein–protein interfaces through comparative analysis of homologues
I Mihalek, I Reš, O Lichtarge
Journal of molecular biology 369 (2), 584-595, 2007
222007
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