vibhor kumar
vibhor kumar
IIIT Delhi
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Efficient endoderm induction from human pluripotent stem cells by logically directing signals controlling lineage bifurcations
KM Loh, LT Ang, J Zhang, V Kumar, J Ang, JQ Auyeong, KL Lee, ...
Cell stem cell 14 (2), 237-252, 2014
Histone Acetylome-wide Association Study of Autism Spectrum Disorder
W Sun, J Poschmann, RCH del Rosario, NN Parikshak, HS Hajan, ...
Cell 167 (5), 1385-1397. e11, 2016
Uniform, optimal signal processing of mapped deep-sequencing data
V Kumar, M Muratani, NA Rayan, P Kraus, T Lufkin, HH Ng, S Prabhakar
Nature biotechnology 31 (7), 615-622, 2013
Longitudinal single-cell RNA sequencing of patient-derived primary cells reveals drug-induced infidelity in stem cell hierarchy
Nature communications 9, 2018
In vivo epigenomic profiling of germ cells reveals germ cell molecular signatures
JH Ng, V Kumar, M Muratani, P Kraus, JC Yeo, LP Yaw, K Xue, T Lufkin, ...
Developmental cell 24 (3), 324-333, 2013
Ncoa3 functions as an essential Esrrb coactivator to sustain embryonic stem cell self-renewal and reprogramming
M Percharde, F Lavial, JH Ng, V Kumar, RA Tomaz, N Martin, JC Yeo, ...
Genes & development 26 (20), 2286-2298, 2012
Three-dimensional cryoEM reconstruction of native LDL particles to 16Å resolution at physiological body temperature
V Kumar, SJ Butcher, K Öörni, P Engelhardt, J Heikkonen, K Kaski, ...
PloS one 6 (5), e18841, 2011
Oligomerization of hantavirus N protein: C-terminal α-helices interact to form a shared hydrophobic space
P Kaukinen, V Kumar, K Tulimäki, P Engelhardt, A Vaheri, A Plyusnin
Journal of virology 78 (24), 13669-13677, 2004
Learning the mental health impact of covid-19 in the united states with explainable artificial intelligence: Observational study
IP Jha, R Awasthi, A Kumar, V Kumar, T Sethi
JMIR mental health 8 (4), e25097, 2021
Oligomerization of hantavirus nucleocapsid protein: analysis of the N-terminal coiled-coil domain
A Alminaite, V Halttunen, V Kumar, A Vaheri, L Holm, A Plyusnin
Journal of virology 80 (18), 9073-9081, 2006
Genome wide analysis reveals Zic3 interaction with distal regulatory elements of stage specific developmental genes in zebrafish
CL Winata, I Kondrychyn, V Kumar, KG Srinivasan, Y Orlov, ...
PLoS Genet 9 (10), e1003852, 2013
CellAtlasSearch: a scalable search engine for single cells
D Srivastava, A Iyer, V Kumar, D Sengupta
Nucleic acids research 46 (W1), W141-W147, 2018
Comprehensive benchmarking reveals H2BK20 acetylation as a distinctive signature of cell-state-specific enhancers and promoters
V Kumar, NA Rayan, M Muratani, S Lim, B Elanggovan, L Xin, T Lu, ...
Genome research 26 (5), 612-623, 2016
Robust filtering and particle picking in micrograph images towards 3D reconstruction of purified proteins with cryo-electron microscopy
V Kumar, J Heikkonen, P Engelhardt, K Kaski
Journal of structural biology 145 (1-2), 41-51, 2004
UniPath: a uniform approach for pathway and gene-set based analysis of heterogeneity in single-cell epigenome and transcriptome profiles.
Smriti Chawla, Sudhagar Samydurai, Say Li Kong, Zhenxun Wang, Wai Leong TAM ...
Nucleic Acids Research, gkaa1138,, 2020
Minimum description length denoising with histogram models
V Kumar, J Heikkonen, J Rissanen, K Kaski
IEEE transactions on signal processing 54 (8), 2922-2928, 2006
Ascorbate and Iron Are Required for the Specification and Long-Term Self-Renewal of Human Skeletal Mesenchymal Stromal Cells
TM Liu, ED Yildirim, P Li, HT Fang, V Denslin, V Kumar, YH Loh, EH Lee, ...
Stem Cell Reports 14 (2), 210-225, 2020
In vivo genome-wide analysis of multiple tissues identifies gene regulatory networks, novel functions and downstream regulatory genes for Bapx1 and its co-regulation with Sox9 …
S Chatterjee, V Sivakamasundari, SP Yap, P Kraus, V Kumar, X Xing, ...
BMC genomics 15 (1), 1-18, 2014
Computational challenges in detection of cancer using cell-free DNA methylation
M Sharma, RK Verma, S Kumar, V Kumar
Computational and Structural Biotechnology Journal, 2021
Integrative multi-omics landscape of fluoxetine action across 27 brain regions reveals global increase in energy metabolism and region-specific chromatin remodelling.
PS Rayan NA, Kumar V, Aow J, Rastegar N, Lim MGL, O'Toole N, Aliwarga E ...
Mol Psychiatry., 10.1038/s41380-022-01725-1, 2022
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