Computational study of bindings of HL9, a nonapeptide fragment of human lysozyme, to HIV-1 fusion protein gp41 YD Hartono, AN Lee, S Lee-Huang, D Zhang Bioorganic & medicinal chemistry letters 21 (6), 1607-1611, 2011 | 19 | 2011 |
Molecular dynamics studies of human receptor molecule in hemagglutinin of 1918 and 2009 H1N1 influenza viruses AN Lee, YD Hartono, T Sun, ML Leow, X Liu, X Huang, D Zhang Journal of molecular modeling 17 (7), 1635-1641, 2011 | 6 | 2011 |
Computational study of uracil tautomeric forms in the ribosome: the case of uracil and 5-oxyacetic acid uracil in the first anticodon position of tRNA YD Hartono, M Ito, A Villa, L Nilsson The Journal of Physical Chemistry B 122 (3), 1152-1160, 2018 | 5 | 2018 |
Adsorption and folding dynamics of MPER of HIV‐1 gp41 in the presence of dpc micelle YD Hartono, YY Mun, D Zhang Proteins: Structure, Function, and Bioinformatics 81 (6), 933-944, 2013 | 5 | 2013 |
Computational study of bindings of HK20 Fab and D5 Fab to HIV-1 gp41 YD Hartono, R Lazim, YM Yip, D Zhang Bioorganic & medicinal chemistry letters 22 (4), 1695-1700, 2012 | 5 | 2012 |
Role of pseudoisocytidine tautomerization in triplex-forming oligonucleotides: in silico and in vitro studies YD Hartono, YV Pabon-Martinez, A Uyar, J Wengel, KE Lundin, R Zain, ... ACS omega 2 (5), 2165-2177, 2017 | 4 | 2017 |
Modeling pK Shift in DNA Triplexes Containing Locked Nucleic Acids YD Hartono, Y Xu, A Karshikoff, L Nilsson, A Villa Journal of chemical information and modeling 58 (4), 773-783, 2018 | 3 | 2018 |
Codon recognition on the ribosome-free energy and QM/MM calculations L Nilsson, A Villa, Y Xu, Y Hartono, M Ito EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 46, S206-S206, 2017 | | 2017 |
Understanding structural features of biomolecular interactions: from classical simulations to ab initio calculations YD Hartono | | 2017 |