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Annie Chateau
Annie Chateau
Maître de conférences, Université de Montpellier
Verified email at lirmm.fr
Title
Cited by
Cited by
Year
An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
R Blanc-Mathieu, B Verhelst, E Derelle, S Rombauts, FY Bouget, I Carré, ...
BMC genomics 15, 1-12, 2014
1102014
Reconstructing ancestral gene orders using conserved intervals
A Bergeron, M Blanchette, A Chateau, C Chauve
Algorithms in Bioinformatics: 4th International Workshop, WABI 2004, Bergen …, 2004
732004
Exact approaches for scaffolding
M Weller, A Chateau, R Giroudeau
BMC bioinformatics 16 (Suppl 14), S2, 2015
312015
Ancestral gene synteny reconstruction improves extant species scaffolding
Y Anselmetti, V Berry, C Chauve, A Chateau, E Tannier, S Bérard
BMC genomics 16, 1-13, 2015
272015
A complexity and approximation framework for the maximization scaffolding problem
A Chateau, R Giroudeau
Theoretical Computer Science 595, 92-106, 2015
272015
A CSP approach for metamodel instantiation
A Ferdjoukh, AE Baert, A Chateau, R Coletta, C Nebut
2013 IEEE 25th International Conference on Tools with Artificial …, 2013
252013
Computation of perfect DCJ rearrangement scenarios with linear and circular chromosomes
S Bérard, A Chateau, C Chauve, C Paul, E Tannier
Journal of Computational Biology 16 (10), 1287-1309, 2009
252009
Instantiation of Meta-models Constrained with OCL: a CSP Approach
A Ferdjoukh, A Baert, E Bourreau, A Chateau, R Coletta, C Nebut
2015 3rd International Conference on Model-Driven Engineering and Software …, 2015
212015
Machine learning meets genome assembly
K Padovani de Souza, JC Setubal, AC Ponce de Leon F. de Carvalho, ...
Briefings in Bioinformatics 20 (6), 2116-2129, 2019
182019
Inferring positional homologs with common intervals of sequences
G Blin, A Chateau, C Chauve, Y Gingras
Comparative Genomics: RECOMB 2006 International Workshop, RCG 2006 Montreal …, 2006
182006
Aligning the unalignable: bacteriophage whole genome alignments
S Bérard, A Chateau, N Pompidor, P Guertin, A Bergeron, KM Swenson
BMC bioinformatics 17, 1-13, 2016
172016
Complexity and Polynomial-Time Approximation Algorithms around the Scaffolding Problem
A Chateau, R Giroudeau
These proceedings contain the papers that were presented at the First …, 2014
132014
Measuring differences to compare sets of models and improve diversity in MDE
A Ferdjoukh, F Galinier, E Bourreau, A Chateau, C Nebut
ICSEA: International Conference on Software Engineering Advances, 2017
122017
Perfect DCJ rearrangement
S Bérard, A Chateau, C Chauve, C Paul, E Tannier
Comparative Genomics: International Workshop, RECOMB-CG 2008, Paris, France …, 2008
102008
On the complexity of scaffolding problems: from cliques to sparse graphs
M Weller, A Chateau, R Giroudeau
Combinatorial Optimization and Applications: 9th International Conference …, 2015
92015
Scaffolding problems revisited: complexity, approximation and fixed parameter tractable algorithms, and some special cases
M Weller, A Chateau, C Dallard, R Giroudeau
Algorithmica 80 (6), 1771-1803, 2018
82018
On the linearization of scaffolds sharing repeated contigs
M Weller, A Chateau, R Giroudeau
International Conference on Combinatorial Optimization and Applications, 509-517, 2017
82017
A Model-Driven Approach to Generate Relevant and Realistic Datasets.
A Ferdjoukh, E Bourreau, A Chateau, C Nebut
SEKE, 105-109, 2016
82016
An Integer Linear Programming Approach for Genome Scaffolding
N Briot, A Chateau, R Coletta, S de Givry, P Leleux, T Schiex
72014
Complexity and lowers bounds for power edge set problem
B Darties, N Champseix, A Chateau, R Giroudeau, M Weller
Journal of Discrete Algorithms 52, 70-91, 2018
62018
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Articles 1–20