Vishy Iyer
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An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
Comprehensive Identification of Cell Cycle–regulated Genes of the Yeast Saccharomyces cerevisiae by Microarray Hybridization
PT Spellman, G Sherlock, MQ Zhang, VR Iyer, K Anders, MB Eisen, ...
Molecular biology of the cell 9 (12), 3273-3297, 1998
Exploring the metabolic and genetic control of gene expression on a genomic scale
JL DeRisi, VR Iyer, PO Brown
Science 278 (5338), 680-686, 1997
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
The accessible chromatin landscape of the human genome
RE Thurman, E Rynes, R Humbert, J Vierstra, MT Maurano, E Haugen, ...
Nature 489 (7414), 75-82, 2012
Systematic variation in gene expression patterns in human cancer cell lines
DT Ross, U Scherf, MB Eisen, CM Perou, C Rees, P Spellman, V Iyer, ...
Nature genetics 24 (3), 227-235, 2000
The transcriptional program in the response of human fibroblasts to serum
VR Iyer, MB Eisen, DT Ross, G Schuler, T Moore, JCF Lee, JM Trent, ...
science 283 (5398), 83-87, 1999
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ...
Genome research 22 (9), 1813-1831, 2012
Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF
VR Iyer, CE Horak, CS Scafe, D Botstein, M Snyder, PO Brown
Nature 409 (6819), 533-538, 2001
FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin
PG Giresi, J Kim, RM McDaniell, VR Iyer, JD Lieb
Genome research 17 (6), 877-885, 2007
Drug target validation and identification of secondary drug target effects using DNA microarrays
MJ Marton, JL DeRisi, HA Bennett, VR Iyer, MR Meyer, CJ Roberts, ...
Nature medicine 4 (11), 1293-1301, 1998
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
L Song, Z Zhang, LL Grasfeder, AP Boyle, PG Giresi, BK Lee, ...
Genome research 21 (10), 1757-1767, 2011
Whole-genome expression analysis of snf/swi mutants of Saccharomyces cerevisiae
P Sudarsanam, VR Iyer, PO Brown, F Winston
Proceedings of the National Academy of Sciences 97 (7), 3364-3369, 2000
Genome-wide analysis of the biology of stress responses through heat shock transcription factor
JS Hahn, Z Hu, DJ Thiele, VR Iyer
Molecular and cellular biology 24 (12), 5249-5256, 2004
Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation
S Shivaswamy, A Bhinge, Y Zhao, S Jones, M Hirst, VR Iyer
PLoS biology 6 (3), e65, 2008
Poly (dA: dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure.
V Iyer, K Struhl
The EMBO journal 14 (11), 2570-2579, 1995
Genetic reconstruction of a functional transcriptional regulatory network
Z Hu, PJ Killion, VR Iyer
Nature genetics 39 (5), 683-687, 2007
Genome-Wide Association Study in Asian Populations Identifies Variants in ETS1 and WDFY4 Associated with Systemic Lupus Erythematosus
W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ...
PLoS genetics 6 (2), e1000841, 2010
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
AP Boyle, L Song, BK Lee, D London, D Keefe, E Birney, VR Iyer, ...
Genome research 21 (3), 456-464, 2011
Toward understanding the genetics of alcohol drinking through transcriptome meta-analysis
MK Mulligan, I Ponomarev, RJ Hitzemann, JK Belknap, B Tabakoff, ...
Proceedings of the National Academy of Sciences 103 (16), 6368-6373, 2006
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