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|Spread, Circulation, and Evolution of the Middle East Respiratory Syndrome Coronavirus|
M Cotten, SJ Watson, AI Zumla, HQ Makhdoom, AL Palser, SH Ong, ...
mBio 5 (1), e01062-13, 2014
|IVA: accurate de novo assembly of RNA virus genomes|
M Hunt, A Gall, SH Ong, J Brener, B Ferns, P Goulder, E Nastouli, ...
Bioinformatics 31 (14), 2374-2376, 2015
|Genomic epidemiology of a dengue virus epidemic in urban Singapore|
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Journal of Virology 83 (9), 4163-4173, 2009
|Species Identification and Profiling of Complex Microbial Communities Using Shotgun Illumina Sequencing of 16S rRNA Amplicon Sequences|
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PLOS ONE 8 (4), e60811, 2013
|A method for full genome sequencing of all four serotypes of the dengue virus|
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Journal of Virological Methods 169 (1), 202-206, 2010
|Periodic re-emergence of endemic strains with strong epidemic potential—A proposed explanation for the 2004 Indonesian dengue epidemic|
SH Ong, JT Yip, YL Chen, W Liu, S Harun, E Lystiyaningsih, B Heriyanto, ...
Infection, Genetics and Evolution 8 (2), 191-204, 2008
|Deep sequencing of norovirus genomes defines evolutionary patterns in an urban tropical setting|
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Journal of Virology 88 (19), 11056-11069, 2014
|Plasmablasts Generated during Repeated Dengue Infection Are Virus Glycoprotein–Specific and Bind to Multiple Virus Serotypes|
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The Journal of Immunology 189 (12), 5877-5885, 2012
|IDBD: infectious disease biomarker database|
IS Yang, C Ryu, KJ Cho, JK Kim, SH Ong, WP Mitchell, BS Kim, HB Oh, ...
Nucleic Acids Research 36 (suppl 1), D455-D460, 2008
|Genome-wide CRISPR-KO Screen Uncovers mTORC1-Mediated Gsk3 Regulation in Naive Pluripotency Maintenance and Dissolution|
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Cell Reports 24 (2), 489-502, 2018
|Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe|
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PLoS biology 15 (6), e2001855, 2017
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Genome Research 24 (10), 1559-1571, 2014
|Optimised metrics for CRISPR-KO screens with second-generation gRNA libraries|
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Scientific Reports 7 (1), 7384, 2017
|From clinical sample to complete genome: Comparing methods for the extraction of HIV-1 RNA for high-throughput deep sequencing|
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Virus research 239, 10-16, 2017
|Epidermal tissue adapts to restrain progenitors carrying clonal p53 mutations|
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Cell stem cell 23 (5), 687-699. e8, 2018
|DengueInfo: A web portal to dengue information resources|
MJ Schreiber, SH Ong, RCG Holland, ML Hibberd, SG Vasudevan, ...
Infection, Genetics and Evolution 7 (4), 540-541, 2007
|Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver|
C Wymant, F Blanquart, T Golubchik, A Gall, M Bakker, D Bezemer, ...
Virus Evolution 4 (1), vey007, 2018
|Patient-Based Transcriptome-Wide Analysis Identify Interferon and Ubiquination Pathways as Potential Predictors of Influenza A Disease Severity|
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PloS ONE 9 (11), e111640, 2014
|A genomics approach to understanding host response during dengue infection|
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