John Kececioglu

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David SankoffUniversity of OttawaVerified email at uottawa.ca
Dan DeBlasioAssistant Professor, Computer Science, University of Texas at El PasoVerified email at utep.edu
Richard SnodgrassProfessor of Computer Science, University of ArizonaVerified email at email.arizona.edu
Abhijit SahaNSF's National Optical-Infrared Astronomy Rsearch Laboratory (NOIRLab)Verified email at noao.edu
Thomas MathesonNOIRLabVerified email at noirlab.edu
Travis WheelerAssociate Professor, Dept Pharmacy Practice & Science, U. ArizonaVerified email at traviswheeler.com
Petra MutzelProfessorin für Informatik, Universität BonnVerified email at cs.uni-bonn.de
Gautham NarayanUniversity of Illinois at Urbana-ChampaignVerified email at illinois.edu
R RaviCarnegie Mellon UnviersityVerified email at andrew.cmu.edu
Gene MyersMax-Planck Institute for Molecular Cell Biology & GeneticsVerified email at mpi-cbg.de
Stephen AltschulNCBI NLM NIHVerified email at nih.gov
Alejandro SchafferComputer Scientist, National Institutes of HealthVerified email at nih.gov
Carlos ScheideggerPosit PBC (fka RStudio)Verified email at posit.co
Saumya DebrayProfessor of Computer Science, University of ArizonaVerified email at cs.arizona.edu
Spencer KriegerCarnegie Mellon UniversityVerified email at andrew.cmu.edu
Knut ReinertFU Berlin / MPI MolgenVerified email at fu-berlin.de
Kurt MehlhornProfessor of Computer Science, Max Planck Institute for Informatics, Saarland Informatics CampusVerified email at mpi-inf.mpg.de
Prof. Dr. Hans-Peter LenhofCenter for Bioinformatics, Saarland Informatics CampusVerified email at bioinf.uni-sb.de
Christian CollbergProfessor of Computer Science, University of ArizonaVerified email at cs.arizona.edu
Ilias TagkopoulosProfessor, Computer Science and Genome Center, University of California, DavisVerified email at ucdavis.edu

John Kececioglu

Professor of Computer Science, The University of Arizona

Verified email at cs.arizona.edu - Homepage

Applied algorithms bioinformatics and computational biology computational astronomy combinatorial optimization


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
A tool for multiple sequence alignment DJ Lipman, SF Altschul, JD Kececioglu Proceedings of the National Academy of Sciences 86 (12), 4412-4415, 1989	769	1989
Exact and approximation algorithms for sorting by reversals, with application to genome rearrangement J Kececioglu, D Sankoff Algorithmica 13 (1), 180-210, 1995	381	1995
Combinatorial algorithms for DNA sequence assembly JD Kececioglu, EW Myers Algorithmica 13 (1), 7-51, 1995	341	1995
Multiple alignment by aligning alignments TJ Wheeler, JD Kececioglu Bioinformatics 23 (13), i559-i568, 2007	294	2007
Improving the practical space and time efficiency of the shortest-paths approach to sum-of-pairs multiple sequence alignment SK Gupta, JD Kececioglu, AA Schäffer Journal of Computational Biology 2 (3), 459-472, 1995	281	1995
Dynamic path-based software watermarking C Collberg, E Carter, S Debray, A Huntwork, J Kececioglu, C Linn, ... Proceedings of the ACM SIGPLAN 2004 conference on Programming language …, 2004	231	2004
Exact and approximation algorithms for the inversion distance between two chromosomes J Kececioglu, D Sankoff Annual Symposium on Combinatorial Pattern Matching, 87-105, 1993	213	1993
The maximum weight trace problem in multiple sequence alignment J Kececioglu Annual Symposium on Combinatorial Pattern Matching, 106-119, 1993	190	1993
Of mice and men: Algorithms for evolutionary distances between genomes with translocation JD Kececiogluy, R Raviz Symposium on Discrete Algorithms 604, 613, 1995	166	1995
Efficient bounds for oriented chromosome inversion distance J Kececioglu, D Sankoff Annual Symposium on Combinatorial Pattern Matching, 307-325, 1994	144	1994
A branch-and-cut algorithm for multiple sequence alignment K Reinert, HP Lenhof, P Mutzel, K Mehlhorn, JD Kececioglu Proceedings of the first annual international conference on Computational …, 1997	100	1997
Steiner points in the space of genome rearrangements D Sankoff, G Sundaram, J Kececioglu International Journal of Foundations of Computer Science 7 (01), 1-9, 1996	96	1996
Reconstructing a history of recombinations from a set of sequences J Kececioglu, D Gusfield Discrete Applied Mathematics 88 (1-3), 239-260, 1998	85	1998
Exact and approximation algorithms for DNA sequence reconstruction. JD Kececioglu The University of Arizona., 1991	81	1991
A polyhedral approach to sequence alignment problems JD Kececioglu, HP Lenhof, K Mehlhorn, P Mutzel, K Reinert, M Vingron Discrete applied mathematics 104 (1-3), 143-186, 2000	77	2000
Aligning alignments exactly J Kececioglu, D Starrett Proceedings of the eighth annual international conference on Research in …, 2004	62	2004
HIV-1 Encodes a Sequence Overlappingenv gp41 With Highly Significant Similarity to Selenium-Dependent Glutathione Peroxidases EW Taylor, A Bhat, RG Nadimpalli, W Zhang, J Kececioglu JAIDS Journal of Acquired Immune Deficiency Syndromes 15 (5), 393-394, 1997	52	1997
The ANTARES astronomical time-domain event broker T Matheson, C Stubens, N Wolf, CH Lee, G Narayan, A Saha, A Scott, ... The Astronomical Journal 161 (3), 107, 2021	47	2021
Accuracy estimation and parameter advising for protein multiple sequence alignment J Kececioglu, D DeBlasio Journal of Computational Biology 20 (4), 259-279, 2013	39	2013
Aligning alignments JD Kececioglu, W Zhang Annual Symposium on Combinatorial Pattern Matching, 189-208, 1998	39	1998

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