Nick Croucher
Nick Croucher
Verified email at imperial.ac.uk
Title
Cited by
Cited by
Year
Rapid pneumococcal evolution in response to clinical interventions
NJ Croucher, SR Harris, C Fraser, MA Quail, J Burton, M van der Linden, ...
Science 331 (6016), 430-434, 2011
8072011
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
NJ Croucher, AJ Page, TR Connor, AJ Delaney, JA Keane, SD Bentley, ...
Nucleic acids research 43 (3), e15-e15, 2014
6702014
Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak
CU Köser, MTG Holden, MJ Ellington, EJP Cartwright, NM Brown, ...
New England Journal of Medicine 366 (24), 2267-2275, 2012
6392012
Evidence for several waves of global transmission in the seventh cholera pandemic
A Mutreja, DW Kim, NR Thomson, TR Connor, JH Lee, S Kariuki, ...
Nature 477 (7365), 462-465, 2011
5162011
Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species
C Donati, NL Hiller, H Tettelin, A Muzzi, NJ Croucher, SV Angiuoli, ...
Genome biology 11 (10), R107, 2010
3252010
Antibiotic treatment of Clostridium difficile carrier mice triggers a supershedder state, spore-mediated transmission, and severe disease in immunocompromised hosts
TD Lawley, S Clare, AW Walker, D Goulding, RA Stabler, N Croucher, ...
Infection and immunity 77 (9), 3661-3669, 2009
3022009
Population genomics of post-vaccine changes in pneumococcal epidemiology
NJ Croucher, JA Finkelstein, SI Pelton, PK Mitchell, GM Lee, J Parkhill, ...
Nature genetics 45 (6), 656, 2013
2922013
Dense genomic sampling identifies highways of pneumococcal recombination
C Chewapreecha, SR Harris, NJ Croucher, C Turner, P Marttinen, ...
Nature genetics 46 (3), 305, 2014
2882014
Studying bacterial transcriptomes using RNA-seq
NJ Croucher, NR Thomson
Current opinion in microbiology 13 (5), 619-624, 2010
2702010
A strand-specific RNA–Seq analysis of the transcriptome of the typhoid bacillus salmonella typhi
TT Perkins, RA Kingsley, MC Fookes, PP Gardner, KD James, L Yu, ...
PLoS genetics 5 (7), e1000569, 2009
2502009
Proteomic and genomic characterization of highly infectious Clostridium difficile 630 spores
TD Lawley, NJ Croucher, L Yu, S Clare, M Sebaihia, D Goulding, ...
Journal of bacteriology 191 (17), 5377-5386, 2009
2222009
Sequence-based analysis uncovers an abundance of non-coding RNA in the total transcriptome of Mycobacterium tuberculosis
KB Arnvig, I Comas, NR Thomson, J Houghton, HI Boshoff, NJ Croucher, ...
PLoS Pathog 7 (11), e1002342, 2011
2002011
Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis
MTG Holden, H Hauser, M Sanders, TH Ngo, I Cherevach, A Cronin, ...
PLoS One 4 (7), e6072, 2009
2002009
Detection of recombination events in bacterial genomes from large population samples
P Marttinen, WP Hanage, NJ Croucher, TR Connor, SR Harris, ...
Nucleic acids research 40 (1), e6-e6, 2011
1862011
Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81
NJ Croucher, D Walker, P Romero, N Lennard, GK Paterson, NC Bason, ...
Journal of bacteriology 191 (5), 1480-1489, 2009
1572009
Pneumococcal capsular switching: a historical perspective
KL Wyres, LM Lambertsen, NJ Croucher, L McGee, A von Gottberg, ...
Journal of Infectious Diseases 207 (3), 439-449, 2013
1542013
Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes
C Chewapreecha, P Marttinen, NJ Croucher, SJ Salter, SR Harris, ...
PLoS Genet 10 (8), e1004547, 2014
1342014
Phandango: an interactive viewer for bacterial population genomics
J Hadfield, NJ Croucher, RJ Goater, K Abudahab, DM Aanensen, ...
Bioinformatics 34 (2), 292-293, 2017
1242017
Diversification of bacterial genome content through distinct mechanisms over different timescales
NJ Croucher, PG Coupland, AE Stevenson, A Callendrello, SD Bentley, ...
Nature communications 5, 5471, 2014
1172014
A simple method for directional transcriptome sequencing using Illumina technology
NJ Croucher, MC Fookes, TT Perkins, DJ Turner, SB Marguerat, T Keane, ...
Nucleic acids research 37 (22), e148-e148, 2009
1092009
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Articles 1–20