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Carlos Bueno
Carlos Bueno
Verified email at rice.edu
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Year
Assemblies of calcium/calmodulin-dependent kinase II with actin and their dynamic regulation by calmodulin in dendritic spines
Q Wang, M Chen, NP Schafer, C Bueno, SS Song, A Hudmon, ...
Proceedings of the National Academy of Sciences 116 (38), 18937-18942, 2019
472019
OpenAWSEM with Open3SPN2: A fast, flexible, and accessible framework for large-scale coarse-grained biomolecular simulations
W Lu, C Bueno, NP Schafer, J Moller, S Jin, X Chen, M Chen, X Gu, ...
PLoS computational biology 17 (2), e1008308, 2021
312021
The role of the Arp2/3 complex in shaping the dynamics and structures of branched actomyosin networks
J Liman, C Bueno, Y Eliaz, NP Schafer, MN Waxham, PG Wolynes, ...
Proceedings of the National Academy of Sciences 117 (20), 10825-10831, 2020
312020
Resolving the NFκB heterodimer binding paradox: Strain and frustration guide the binding of dimeric transcription factors
DA Potoyan, C Bueno, W Zheng, EA Komives, PG Wolynes
Journal of the American Chemical Society 139 (51), 18558-18566, 2017
292017
AWSEM-Suite: a protein structure prediction server based on template-guided, coevolutionary-enhanced optimized folding landscapes
S Jin, VG Contessoto, M Chen, NP Schafer, W Lu, X Chen, C Bueno, ...
Nucleic acids research 48 (W1), W25-W30, 2020
232020
Protein structure prediction in CASP13 using AWSEM-suite
S Jin, M Chen, X Chen, C Bueno, W Lu, NP Schafer, X Lin, JN Onuchic, ...
Journal of chemical theory and computation 16 (6), 3977-3988, 2020
172020
Computationally exploring the mechanism of bacteriophage T7 gp4 helicase translocating along ssDNA
S Jin, C Bueno, W Lu, Q Wang, M Chen, X Chen, PG Wolynes, Y Gao
Proceedings of the National Academy of Sciences 119 (32), e2202239119, 2022
82022
The marionette mechanism of domain–domain communication in the antagonist, agonist, and coactivator responses of the estrogen receptor
X Chen, S Jin, M Chen, C Bueno, PG Wolynes
Proceedings of the National Academy of Sciences 120 (6), e2216906120, 2023
52023
A structural dynamics model for how CPEB3 binding to SUMO2 can regulate translational control in dendritic spines
X Gu, NP Schafer, C Bueno, W Lu, PG Wolynes
PLOS Computational Biology 18 (11), e1010657, 2022
52022
A generalized Flory-Stockmayer kinetic theory of connectivity percolation and rigidity percolation of cytoskeletal networks
C Bueno, J Liman, NP Schafer, MS Cheung, PG Wolynes
PLoS Computational Biology 18 (5), e1010105, 2022
42022
Frustration and Direct-Coupling Analyses to Predict Formation and Function of Adeno-Associated Virus
NN Thadani, Q Zhou, KR Gamas, S Butler, C Bueno, NP Schafer, ...
Biophysical Journal 120 (3), 489-503, 2021
42021
First evidence of detection of Asia/South America II (A/SAII) infectious bronchitis virus in a commercial broiler flock in Peru
L Tataje‐Lavanda, F Falconi‐Agapito, Á Montalván, C Bueno, D Requena, ...
Veterinary Record Case Reports 4 (1), e000292, 2016
42016
Nicotinamidase/pyrazinamidase of Mycobacterium tuberculosis forms homo-dimers stabilized by disulfide bonds
D Rueda, P Sheen, RH Gilman, C Bueno, M Santos, V Pando-Robles, ...
Tuberculosis 94 (6), 644-648, 2014
42014
Prediction of changes in protein folding stability upon single residue mutations
CA Bueno, DA Potoyan, RR Cheng, PG Wolynes
Biophysical Journal 114 (3), 199a, 2018
22018
Metallochaperones are needed for Mycobacterium tuberculosis and Escherichia coli nicotinamidase-pyrazinamidase activity
P Sheen, A Monsalve, J Campos, R Huerta, R Antiparra, H Arteaga, ...
Journal of bacteriology 202 (2), 10.1128/jb. 00331-19, 2020
12020
Reassessing the Exon-Foldon correspondence using Frustration Analysis
EA Galpern, H Jaafari, C Bueno, PG Wolynes, DU Ferreiro
arXiv preprint arXiv:2401.02371, 2024
2024
Actin filament sliding in CaMKII-actin bundles
CAB Basurco, NP Schafer, N Waxham, MS Cheung, PG Wolynes
Biophysical Journal 122 (3), 167a, 2023
2023
Physical and Evolutionary Free Energy Landscapes of Devolved Protein Sequences
H Jaafari, N Schafer, C Bueno, J Martin, F Morcos, P Wolynes
APS March Meeting Abstracts 2023, N00. 278, 2023
2023
Filament sliding in simulations of CaMKII-actin bundles
C Bueno, N Schafer, N Waxham, M Cheung, P Wolynes
APS March Meeting Abstracts 2023, K11. 007, 2023
2023
Mesoscale Models for the Study of Emergent Behaviors Arising from Protein Interactions
CA Bueno Basurco
Rice University, 2022
2022
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Articles 1–20