The origin and evolution of cell types D Arendt, JM Musser, CVH Baker, A Bergman, C Cepko, DH Erwin, ... Nature Reviews Genetics 17 (12), 744-757, 2016 | 673 | 2016 |
Profiling cellular diversity in sponges informs animal cell type and nervous system evolution JM Musser, KJ Schippers, M Nickel, G Mizzon, AB Kohn, C Pape, ... Science 374 (6568), 717-723, 2021 | 179 | 2021 |
Mapping single-cell atlases throughout Metazoa unravels cell type evolution AJ Tarashansky, JM Musser, M Khariton, P Li, D Arendt, SR Quake, ... Elife 10, e66747, 2021 | 164 | 2021 |
Evolution of neuronal types and families D Arendt, PY Bertucci, K Achim, JM Musser Current opinion in neurobiology 56, 144-152, 2019 | 114 | 2019 |
Ultraviolet visual sensitivity in three avian lineages: paleognaths, parrots, and passerines Z Aidala, L Huynen, PLR Brennan, J Musser, A Fidler, N Chong, ... Journal of Comparative Physiology A 198, 495-510, 2012 | 83 | 2012 |
Character trees from transcriptome data: origin and individuation of morphological characters and the so‐called “species signal” JM Musser, GP Wagner Journal of Experimental Zoology Part B: Molecular and Developmental …, 2015 | 71 | 2015 |
Pervasive correlated evolution in gene expression shapes cell and tissue type transcriptomes C Liang, JM Musser, A Cloutier, RO Prum, GP Wagner Genome Biology and Evolution 10 (2), 538-552, 2018 | 59 | 2018 |
Whole-body single-cell sequencing reveals transcriptional domains in the annelid larval body K Achim, N Eling, HM Vergara, PY Bertucci, J Musser, P Vopalensky, ... Molecular biology and evolution 35 (5), 1047-1062, 2018 | 55 | 2018 |
Single-cell RNA sequencing of the Strongylocentrotus purpuratus larva reveals the blueprint of major cell types and nervous system of a non-chordate deuterostome P Paganos, D Voronov, JM Musser, D Arendt, MI Arnone Elife 10, e70416, 2021 | 45 | 2021 |
Nuclear β‐catenin localization supports homology of feathers, avian scutate scales, and alligator scales in early development JM Musser, GP Wagner, RO Prum Evolution & Development 17 (3), 185-194, 2015 | 38 | 2015 |
Loss and gain of cone types in vertebrate ciliary photoreceptor evolution JM Musser, D Arendt Developmental biology 431 (1), 26-35, 2017 | 29 | 2017 |
Leveraging domain knowledge to improve microscopy image segmentation with lifted multicuts C Pape, A Matskevych, A Wolny, J Hennies, G Mizzon, M Louveaux, ... Frontiers in Computer Science 1, 489875, 2019 | 25 | 2019 |
Divergence in morphology, calls, song, mechanical sounds, and genetics supports species status for the Inaguan hummingbird (Trochilidae: Calliphlox “evelynae” lyrura) TJ Feo, JM Musser, J Berv, CJ Clark The Auk: Ornithological Advances 132 (1), 248-264, 2015 | 22 | 2015 |
Crustacean leg regeneration restores complex microanatomy and cell diversity A Almazán, Ç Çevrim, JM Musser, M Averof, M Paris Science Advances 8 (34), eabn9823, 2022 | 14 | 2022 |
Single-cell atlases of two lophotrochozoan larvae highlight their complex evolutionary histories L Piovani, DJ Leite, LA Yañez Guerra, F Simpson, JM Musser, ... Science Advances 9 (31), eadg6034, 2023 | 13 | 2023 |
Cross-phyla protein annotation by structural prediction and alignment F Ruperti, N Papadopoulos, JM Musser, M Mirdita, M Steinegger, ... Genome Biology 24 (1), 113, 2023 | 13 | 2023 |
H Baker CV D Arendt, JM Musser Bergman A., Cepko C., Erwin DH, Pavlicev M., Schlosser G., Widder S …, 2016 | 9 | 2016 |
Evolution of sister cell types by individuation D Arendt, JM Musser, CV Baker, A Bergman, CL Cepko, DH Erwin, ... Nat. Rev. Genet 17, 744-757, 2016 | 9 | 2016 |
Molecular profiling of sponge deflation reveals an ancient relaxant-inflammatory response F Ruperti, I Becher, A Stokkermans, L Wang, N Marschlich, C Potel, ... Current Biology 34 (2), 361-375. e9, 2024 | 6 | 2024 |
Beyond sequence similarity: cross-phyla protein annotation by structural prediction and alignment F Ruperti, N Papadopoulos, J Musser, M Mirdita, M Steinegger, D Arendt bioRxiv, 2022.07. 05.498892, 2022 | 4 | 2022 |