R. Gonzalo Parra
Title
Cited by
Cited by
Year
Protein frustratometer: a tool to localize energetic frustration in protein molecules
M Jenik, RG Parra, LG Radusky, A Turjanski, PG Wolynes, DU Ferreiro
Nucleic acids research 40 (W1), W348-W351, 2012
1322012
Protein Frustratometer 2: a tool to localize energetic frustration in protein molecules, now with electrostatics
RG Parra, NP Schafer, LG Radusky, MY Tsai, AB Guzovsky, PG Wolynes, ...
Nucleic acids research 44 (W1), W356-W360, 2016
1052016
RepeatsDB: a database of tandem repeat protein structures
T Di Domenico, E Potenza, I Walsh, R Gonzalo Parra, M Giollo, ...
Nucleic acids research 42 (D1), D352-D357, 2014
572014
Structural and energetic characterization of the ankyrin repeat protein family
RG Parra, R Espada, N Verstraete, DU Ferreiro
PLoS computational biology 11 (12), e1004659, 2015
372015
Detecting repetitions and periodicities in proteins by tiling the structural space
RG Parra, R Espada, IE Sánchez, MJ Sippl, DU Ferreiro
The Journal of Physical Chemistry B 117 (42), 12887-12897, 2013
322013
Local frustration around enzyme active sites
MI Freiberger, AB Guzovsky, PG Wolynes, RG Parra*, DU Ferreiro*
Proceedings of the National Academy of Sciences 116 (10), 4037-4043 …, 2019
232019
PROSSTT: probabilistic simulation of single-cell RNA-seq data for complex differentiation processes
N Papadopoulos, RG Parra, J Söding
Bioinformatics 35 (18), 3517-3519, 2019
212019
Highlights from the 1st ISCB Latin American Student Council Symposium 2014
RG Parra, FL Simonetti, M Hasenahuer, G Olguin-Orellana, S Avinash K
BMC bioinformatics 16 (3), A1, 2015
21*2015
Capturing coevolutionary signals in repeat proteins
R Espada, RG Parra, T Mora, AM Walczak, DU Ferreiro
BMC Bioinformatics 16, 207, 2015
202015
Reconstructing complex lineage trees from scRNA-seq data using MERLoT
RG Parra*, N Papadopoulos, L Ahumada-Arranz, J El Kholtei, ...
Nucleic Acids Research, gkz706, 261768 (* corresponding authors), 2019
192019
Repeat Proteins challenge the concept of structural domains
R Espada*, RG Parra*, MJ Sippl, T Mora, AM Walczak, DU Ferreiro, ...
Biochemical Society Transactions 43 (5), 844-849, 2015
182015
The upside of failure: how regional student groups learn from their mistakes
T Mishra, RG Parra, T Abeel
PLoS computational biology 10 (8), e1003768, 2014
162014
INSECT: IN-silico SEarch for Co-occurring Transcription factors
CO Rohr*, RG Parra*, P Yankilevich, C Perez-Castro, ...
Bioinformatics 29 (22), 2852-2858, 2013
132013
INSECT 2.0: a web-server for genome-wide cis-regulatory modules prediction
RG Parra*, CO Rohr*, D Koile, C Perez-Castro, P Yankilevich, ...
Bioinformatics, btv726, 2015
112015
Reflections on a journey: a retrospective of the ISCB Student Council symposium series
M Hassan, AA Namasivayam, D DeBlasio, N Fatima, B Siranosian, ...
BMC bioinformatics 19 (12), 1-8, 2018
72018
ISCB-student council narratives: Strategical development of the ISCB-regional student groups in 2016
S Shome, P Meysman, RG Parra, AM Monzon, N Palopoli, B White, ...
F1000Research 5, 2016
72016
Protein repeats from first principles
P Turjanski, RG Parra, R Espada, V Becher, DU Ferreiro
Scientific Reports 6, Article number: 23959 (2016), http://www.nature.com …, 2016
72016
Inferring repeat-protein energetics from evolutionary information
R Espada, RG Parra, T Mora, AM Walczak, DU Ferreiro
PLoS computational biology 13 (6), e1005584, 2017
52017
Highlights from the 11th ISCB student council symposium 2015
K Wilkins, M Hassan, M Francescatto, J Jespersen, RG Parra, B Cuypers, ...
BMC bioinformatics 17 (3), 203-209, 2016
42016
Highlights of the 1st Argentine Symposium of Young Bioinformatics Researchers (1SAJIB) organized by the ISCB RSG-Argentina
RG Parra, LA Defelipe, AB Guzovsky, A Monzón, F Cravero, E Mancini, ...
PeerJ, 2016
42016
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Articles 1–20