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David Hess
David Hess
Associate Professor of Biology, Santa Clara University
Verified email at scu.edu
Title
Cited by
Cited by
Year
Quantitative analysis of fitness and genetic interactions in yeast on a genome scale
A Baryshnikova, M Costanzo, Y Kim, H Ding, J Koh, K Toufighi, JY Youn, ...
Nature methods 7 (12), 1017-1024, 2010
4092010
Exploring the functional landscape of gene expression: directed search of large microarray compendia
MA Hibbs, DC Hess, CL Myers, C Huttenhower, K Li, OG Troyanskaya
Bioinformatics 23 (20), 2692-2699, 2007
3022007
Computationally driven, quantitative experiments discover genes required for mitochondrial biogenesis
DC Hess, CL Myers, C Huttenhower, MA Hibbs, AP Hayes, J Paw, ...
PLoS Genet 5 (3), e1000407-e1000407, 2009
1832009
Predicting gene function in a hierarchical context with an ensemble of classifiers
Y Guan, CL Myers, DC Hess, Z Barutcuoglu, A Caudy, O Troyanskaya
Genome biology 9 (Suppl 1), S3, 2008
1802008
Ammonium toxicity and potassium limitation in yeast
DC Hess, W Lu, JD Rabinowitz, D Botstein
PLoS Biol 4 (11), e351, 2006
1762006
Yeast metabolic and signaling genes are required for heat-shock survival and have little overlap with the heat-induced genes
PA Gibney, C Lu, AA Caudy, DC Hess, D Botstein
Proceedings of the National Academy of Sciences 110 (46), E4393-E4402, 2013
1332013
Broad metabolic sensitivity profiling of a prototrophic yeast deletion collection
B VanderSluis, DC Hess, C Pesyna, EW Krumholz, T Syed, B Szappanos, ...
Genome Biol 15, R64, 2014
812014
Spt10-dependent transcriptional activation in Saccharomyces cerevisiae requires both the Spt10 acetyltransferase domain and Spt21
D Hess, B Liu, NR Roan, R Sternglanz, F Winston
Molecular and cellular biology 24 (1), 135-143, 2004
472004
Directing experimental biology: a case study in mitochondrial biogenesis
MA Hibbs, CL Myers, C Huttenhower, DC Hess, K Li, AA Caudy, ...
PLoS Comput Biol 5 (3), e1000322, 2009
452009
The impact of incomplete knowledge on evaluation: an experimental benchmark for protein function prediction
C Huttenhower, MA Hibbs, CL Myers, AA Caudy, DC Hess, ...
Bioinformatics 25 (18), 2404-2410, 2009
432009
Genome sequencing of a Neisseria gonorrhoeae isolate of a successful international clone with decreased susceptibility and resistance to extended-spectrum cephalosporins
D Hess, A Wu, D Golparian, S Esmaili, W Pandori, E Sena, JD Klausner, ...
Antimicrobial agents and chemotherapy 56 (11), 5633-5641, 2012
382012
Simultaneous genome-wide inference of physical, genetic, regulatory, and functional pathway components
CY Park, DC Hess, C Huttenhower, OG Troyanskaya
PLoS Comput Biol 6 (11), e1001009, 2010
342010
Evidence that Spt10 and Spt21 of Saccharomyces cerevisiae play distinct roles in vivo and functionally interact with MCB-binding factor, SCB-binding factor and Snf1
D Hess, F Winston
Genetics 170 (1), 87-94, 2005
302005
Using the Neisseria gonorrhoeae multiantigen sequence-typing method to assess strain diversity and antibiotic resistance in San Francisco, California
S Buono, A Wu, DC Hess, JS Carlson, L Rauch, SS Philip, P Barry, ...
Microbial Drug Resistance 18 (5), 510-517, 2012
252012
Genetic basis of ammonium toxicity resistance in a sake strain of yeast: a Mendelian case
C Reisser, C Dick, L Kruglyak, D Botstein, J Schacherer, DC Hess
G3: Genes| Genomes| Genetics 3 (4), 733-740, 2013
162013
Fluoroquinolone Resistance in Neisseria gonorrhoeae After Cessation of Ciprofloxacin Usage in San Francisco: Using Molecular Typing to Investigate Strain Turnover
K Espinosa, JA Park, JJ Gerrity, S Buono, A Shearer, C Dick, ML Mak, ...
Sexually transmitted diseases 42 (2), 57-63, 2015
142015
Characteristics of males infected with common Neisseria gonorrhoeae sequence types in the Gonococcal Isolate Surveillance Project, San Francisco, California, 2009
KT Bernstein, JL Marcus, PM Barry, MW Pandori, S Buono, D Hess, ...
American journal of epidemiology 178 (8), 1289-1295, 2013
52013
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