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Pavel Zhuravlev
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Protein functional landscapes, dynamics, allostery: a tortuous path towards a universal theoretical framework
PI Zhuravlev, GA Papoian
Quarterly reviews of biophysics 43 (3), 295-332, 2010
1582010
Symmetry, rigidity, and allosteric signaling: from monomeric proteins to molecular machines
D Thirumalai, C Hyeon, PI Zhuravlev, GH Lorimer
Chemical reviews 119 (12), 6788-6821, 2019
852019
Molecular noise of capping protein binding induces macroscopic instability in filopodial dynamics
PI Zhuravlev, GA Papoian
Proceedings of the National Academy of Sciences 106 (28), 11570-11575, 2009
842009
Deconstructing the native state: energy landscapes, function, and dynamics of globular proteins
PI Zhuravlev, CK Materese, GA Papoian
The Journal of Physical Chemistry B 113 (26), 8800-8812, 2009
802009
The 2020 Census Disclosure Avoidance System TopDown Algorithm
JM Abowd, R Ashmead, R Cumings-Menon, S Garfinkel, M Heineck, ...
Harvard Data Science Review, 2022
782022
Force-dependent switch in protein unfolding pathways and transition state movements
PI Zhuravlev, M Hinczewski, S Chakrabarti, S Marqusee, D Thirumalai
Proceedings of the National Academy of Sciences 113 (6), E715–E724, 2016
582016
Propensity to form amyloid fibrils is encoded as excitations in the free energy landscape of monomeric proteins
PI Zhuravlev, G Reddy, JE Straub, D Thirumalai
Journal of molecular biology 426 (14), 2653-2666, 2014
572014
Functional versus folding landscapes: the same yet different
PI Zhuravlev, GA Papoian
Current opinion in structural biology 20 (1), 16-22, 2010
432010
Theory of active transport in filopodia and stereocilia
PI Zhuravlev, Y Lan, MS Minakova, GA Papoian
Proceedings of the National Academy of Sciences 109 (27), 10849-10854, 2012
412012
Design of active transport must be highly intricate: a possible role of myosin and Ena/VASP for G-actin transport in filopodia
PI Zhuravlev, BS Der, GA Papoian
Biophysical journal 98 (8), 1439-1448, 2010
312010
Computing free energy of a large-scale allosteric transition in adenylate kinase using all atom explicit solvent simulations
DA Potoyan, PI Zhuravlev, GA Papoian
The Journal of Physical Chemistry B 116 (5), 1709-1715, 2012
302012
Protein collapse is encoded in the folded state architecture
HS Samanta, PI Zhuravlev, M Hinczewski, N Hori, S Chakrabarti, ...
Soft Matter 13 (19), 3622-3638, 2017
272017
High resolution approach to the native state ensemble kinetics and thermodynamics
S Wu, PI Zhuravlev, GA Papoian
Biophysical journal 95 (12), 5524-5532, 2008
232008
Bayesian and frequentist semantics for common variations of differential privacy: Applications to the 2020 census
D Kifer, JM Abowd, R Ashmead, R Cumings-Menon, P Leclerc, ...
arXiv preprint arXiv:2209.03310, 2022
212022
Computing free energies of protein conformations from explicit solvent simulations
PI Zhuravlev, S Wu, DA Potoyan, M Rubinstein, GA Papoian
Methods 52 (1), 115-121, 2010
182010
Protein fluxes along the filopodium as a framework for understanding the growth-retraction dynamics: the interplay between diffusion and active transport
PI Zhuravlev, GA Papoian
Cell adhesion & migration 5 (5), 448-456, 2011
172011
An uncertainty principle is a price of privacy-preserving microdata
J Abowd, R Ashmead, R Cumings-Menon, S Garfinkel, D Kifer, P Leclerc, ...
Advances in neural information processing systems 34, 11883-11895, 2021
162021
An in-depth examination of requirements for disclosure risk assessment
RS Jarmin, JM Abowd, R Ashmead, R Cumings-Menon, N Goldschlag, ...
Proceedings of the National Academy of Sciences 120 (43), e2220558120, 2023
52023
Low force unfolding of a single-domain protein by parallel pathways
PI Zhuravlev, M Hinczewski, D Thirumalai
The Journal of Physical Chemistry B 125 (7), 1799-1805, 2021
42021
Geographic Spines in the 2020 Census Disclosure Avoidance System
R Cumings-Menon, JM Abowd, R Ashmead, D Kifer, P Leclerc, J Ocker, ...
arXiv preprint arXiv:2203.16654, 2022
32022
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