| Transcriptional regulatory networks in Saccharomyces cerevisiae TI Lee, NJ Rinaldi, F Robert, DT Odom, Z Bar-Joseph, GK Gerber, ... science 298 (5594), 799-804, 2002 | 3845 | 2002 |
| Genome-wide location and function of DNA binding proteins B Ren, F Robert, JJ Wyrick, O Aparicio, EG Jennings, I Simon, J Zeitlinger, ... Science 290 (5500), 2306-2309, 2000 | 2721 | 2000 |
| Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer Y Schlesinger, R Straussman, I Keshet, S Farkash, M Hecht, ... Nature genetics 39 (2), 232-236, 2007 | 1339 | 2007 |
| Allelic inactivation regulates olfactory receptor gene expression A Chess, I Simon, H Cedar, R Axel Cell 78 (5), 823-834, 1994 | 1324 | 1994 |
| Serial regulation of transcriptional regulators in the yeast cell cycle I Simon, J Barnett, N Hannett, CT Harbison, NJ Rinaldi, TL Volkert, ... Cell 106 (6), 697-708, 2001 | 841 | 2001 |
| Evidence for an instructive mechanism of de novo methylation in cancer cells I Keshet, Y Schlesinger, S Farkash, E Rand, M Hecht, E Segal, E Pikarski, ... Nature genetics 38 (2), 149-153, 2006 | 575 | 2006 |
| Studying and modelling dynamic biological processes using time-series gene expression data Z Bar-Joseph, A Gitter, I Simon Nature Reviews Genetics 13 (8), 552-564, 2012 | 534 | 2012 |
| Allele-specific replication timing of imprinted gene regions D Kitsberg, S Selig, M Brandels, I Simon, I Keshet, DJ Driscoll, ... Nature 364 (6436), 459-463, 1993 | 510 | 1993 |
| Developmental programming of CpG island methylation profiles in the human genome R Straussman, D Nejman, D Roberts, I Steinfeld, B Blum, N Benvenisty, ... Nature structural & molecular biology 16 (5), 564-571, 2009 | 504 | 2009 |
| Continuous representations of time-series gene expression data Z Bar-Joseph, GK Gerber, DK Gifford, TS Jaakkola, I Simon Journal of Computational Biology 10 (3-4), 341-356, 2003 | 357 | 2003 |
| A new approach to analyzing gene expression time series data Z Bar-Joseph, G Gerber, DK Gifford, TS Jaakkola, I Simon Proceedings of the sixth annual international conference on Computational …, 2002 | 285 | 2002 |
| Program-specific distribution of a transcription factor dependent on partner transcription factor and MAPK signaling J Zeitlinger, I Simon, CT Harbison, NM Hannett, TL Volkert, GR Fink, ... Cell 113 (3), 395-404, 2003 | 284 | 2003 |
| Modulation of the vitamin D3 response by cancer-associated mutant p53 P Stambolsky, Y Tabach, G Fontemaggi, L Weisz, R Maor-Aloni, Z Sigfried, ... Cancer cell 17 (3), 273-285, 2010 | 281 | 2010 |
| Reconstructing dynamic regulatory maps J Ernst, O Vainas, CT Harbison, I Simon, Z Bar‐Joseph Molecular systems biology 3 (1), 74, 2007 | 240 | 2007 |
| Asynchronous replication of imprinted genes is established in the gametes and maintained during development I Simon, T Tenzen, BE Reubinoff, D Hillman, JR McCarrey, H Cedar Nature 401 (6756), 929-932, 1999 | 214 | 1999 |
| The genome-wide localization of Rsc9, a component of the RSC chromatin-remodeling complex, changes in response to stress M Damelin, I Simon, TI Moy, B Wilson, S Komili, P Tempst, FP Roth, ... Molecular cell 9 (3), 563-573, 2002 | 200 | 2002 |
| Comparative analysis of DNA replication timing reveals conserved large-scale chromosomal architecture E Yaffe, S Farkash-Amar, A Polten, Z Yakhini, A Tanay, I Simon PLoS genetics 6 (7), e1001011, 2010 | 194 | 2010 |
| Global organization of replication time zones of the mouse genome S Farkash-Amar, D Lipson, A Polten, A Goren, C Helmstetter, Z Yakhini, ... Genome research 18 (10), 1562-1570, 2008 | 187 | 2008 |
| Genome-wide transcriptional analysis of the human cell cycle identifies genes differentially regulated in normal and cancer cells Z Bar-Joseph, Z Siegfried, M Brandeis, B Brors, Y Lu, R Eils, BD Dynlacht, ... Proceedings of the National Academy of Sciences 105 (3), 955-960, 2008 | 183 | 2008 |
| Comparing the continuous representation of time-series expression profiles to identify differentially expressed genes Z Bar-Joseph, G Gerber, I Simon, DK Gifford, TS Jaakkola Proceedings of the National Academy of Sciences 100 (18), 10146-10151, 2003 | 177 | 2003 |
