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Gary Andersen
Gary Andersen
Verified email at lbl.gov - Homepage
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Cited by
Year
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
TZ DeSantis, P Hugenholtz, N Larsen, M Rojas, EL Brodie, K Keller, ...
Applied and environmental microbiology 72 (7), 5069-5072, 2006
116132006
Structure, function and diversity of the healthy human microbiome
nature 486 (7402), 207-214, 2012
101252012
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
D McDonald, MN Price, J Goodrich, EP Nawrocki, TZ DeSantis, A Probst, ...
The ISME journal 6 (3), 610-618, 2012
52212012
PyNAST: a flexible tool for aligning sequences to a template alignment
JG Caporaso, K Bittinger, FD Bushman, TZ DeSantis, GL Andersen, ...
Bioinformatics 26 (2), 266-267, 2010
38212010
Deciphering the rhizosphere microbiome for disease-suppressive bacteria
R Mendes, M Kruijt, I De Bruijn, E Dekkers, M Van Der Voort, ...
Science 332 (6033), 1097-1100, 2011
25422011
A framework for human microbiome research
Nature 486 (7402), 215-221, 2012
2383*2012
Deep-sea oil plume enriches indigenous oil-degrading bacteria
TC Hazen, EA Dubinsky, TZ DeSantis, GL Andersen, YM Piceno, N Singh, ...
Science 330 (6001), 204-208, 2010
13812010
NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes
TZ DeSantis, P Hugenholtz, K Keller, EL Brodie, N Larsen, YM Piceno, ...
Nucleic acids research 34 (suppl_2), W394-W399, 2006
12082006
Chronic kidney disease alters intestinal microbial flora
ND Vaziri, J Wong, M Pahl, YM Piceno, J Yuan, TZ DeSantis, Z Ni, ...
Kidney international 83 (2), 308-315, 2013
11342013
Urban aerosols harbor diverse and dynamic bacterial populations
EL Brodie, TZ DeSantis, JPM Parker, IX Zubietta, YM Piceno, ...
Proceedings of the National Academy of Sciences 104 (1), 299-304, 2007
8282007
Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers
Z Liu, TZ DeSantis, GL Andersen, R Knight
Nucleic acids research 36 (18), e120-e120, 2008
6522008
Expansion of urease-and uricase-containing, indole-and p-cresol-forming and contraction of short-chain fatty acid-producing intestinal microbiota in ESRD
J Wong, YM Piceno, TZ DeSantis, M Pahl, GL Andersen, ND Vaziri
American journal of nephrology 39 (3), 230-237, 2014
6202014
High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment
TZ DeSantis, EL Brodie, JP Moberg, IX Zubieta, YM Piceno, GL Andersen
Microbial ecology 53, 371-383, 2007
6012007
Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation
EL Brodie, TZ DeSantis, DC Joyner, SM Baek, JT Larsen, GL Andersen, ...
Applied and environmental microbiology 72 (9), 6288-6298, 2006
5592006
Environmental genomics reveals a single-species ecosystem deep within Earth
D Chivian, EL Brodie, EJ Alm, DE Culley, PS Dehal, TZ DeSantis, ...
Science 322 (5899), 275-278, 2008
5282008
Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients
MJ Cox, M Allgaier, B Taylor, MS Baek, YJ Huang, RA Daly, U Karaoz, ...
PloS one 5 (6), e11044, 2010
5012010
Long-term sustainability of a high-energy, low-diversity crustal biome
LH Lin, PL Wang, D Rumble, J Lippmann-Pipke, E Boice, LM Pratt, ...
Science 314 (5798), 479-482, 2006
4342006
Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata
S Sunagawa, TZ DeSantis, YM Piceno, EL Brodie, MK DeSalvo, ...
The ISME journal 3 (5), 512-521, 2009
4252009
Selective progressive response of soil microbial community to wild oat roots
KM DeAngelis, EL Brodie, TZ DeSantis, GL Andersen, SE Lindow, ...
The ISME journal 3 (2), 168-178, 2009
3912009
High-density microarray of small-subunit ribosomal DNA probes
KH Wilson, WJ Wilson, JL Radosevich, TZ DeSantis, VS Viswanathan, ...
Applied and environmental microbiology 68 (5), 2535-2541, 2002
3832002
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