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Joshua T Atkinson
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Real-time bioelectronic sensing of environmental contaminants
JT Atkinson, L Su, X Zhang, GN Bennett, JJ Silberg, CM Ajo-Franklin
Nature 611 (7936), 548-553, 2022
632022
Metalloprotein switches that display chemical-dependent electron transfer in cells
JT Atkinson, IJ Campbell, EE Thomas, SC Bonitatibus, SJ Elliott, ...
Nature chemical biology 15 (2), 189-195, 2019
532019
Cellular assays for ferredoxins: a strategy for understanding electron flow through protein carriers that link metabolic pathways
JT Atkinson, I Campbell, GN Bennett, JJ Silberg
Biochemistry 55 (51), 7047-7064, 2016
512016
Genome Sequence of Photobacterium mandapamensis Strain svers.1.1, the Bioluminescent Symbiont of the Cardinal Fish Siphamia versicolor
H Urbanczyk, Y Ogura, TA Hendry, AL Gould, N Kiwaki, JT Atkinson, ...
Journal of bacteriology 193 (12), 3144-3145, 2011
282011
Solution‐deposited and Patternable conductive polymer thin‐film electrodes for microbial bioelectronics
CP Tseng, F Liu, X Zhang, PC Huang, I Campbell, Y Li, JT Atkinson, ...
Advanced Materials 34 (13), 2109442, 2022
262022
Circular permutation profiling by deep sequencing libraries created using transposon mutagenesis
JT Atkinson, AM Jones, Q Zhou, JJ Silberg
Nucleic acids research 46 (13), e76-e76, 2018
222018
Living electronics: A catalogue of engineered living electronic components
JT Atkinson, MS Chavez, CM Niman, MY El‐Naggar
Microbial Biotechnology 16 (3), 507-533, 2023
182023
Light-induced patterning of electroactive bacterial biofilms
F Zhao, MS Chavez, KL Naughton, CM Niman, JT Atkinson, JA Gralnick, ...
ACS synthetic biology 11 (7), 2327-2338, 2022
182022
Identification of Multiple Dityrosine Bonds in Materials Composed of the Drosophila Protein Ultrabithorax
DW Howell, SP Tsai, K Churion, J Patterson, C Abbey, JT Atkinson, ...
Advanced functional materials 25 (37), 5988-5998, 2015
152015
The structure of a thermophilic kinase shapes fitness upon random circular permutation
AM Jones, MM Mehta, EE Thomas, JT Atkinson, TH Segall-Shapiro, S Liu, ...
ACS synthetic biology 5 (5), 415-425, 2016
142016
Combinatorial design of chemical‐dependent protein switches for controlling intracellular electron transfer
B Wu, JT Atkinson, D Kahanda, GN Bennett, JJ Silberg
AIChE Journal 66 (3), e16796, 2020
122020
A split methyl halide transferase AND gate that reports by synthesizing an indicator gas
EM Fulk, D Huh, JT Atkinson, M Lie, CA Masiello, JJ Silberg
ACS Synthetic Biology 9 (11), 3104-3113, 2020
112020
Prochlorococcus phage ferredoxin: structural characterization and electron transfer to cyanobacterial sulfite reductases
IJ Campbell, JL Olmos, W Xu, D Kahanda, JT Atkinson, ON Sparks, ...
Journal of Biological Chemistry 295 (31), 10610-10623, 2020
112020
Protein tolerance to random circular permutation correlates with thermostability and local energetics of residue-residue contacts
JT Atkinson, AM Jones, V Nanda, JJ Silberg
Protein Engineering, Design and Selection 32 (11), 489-501, 2019
102019
Determinants of multiheme cytochrome extracellular electron transfer uncovered by systematic peptide insertion
IJ Campbell, JT Atkinson, MD Carpenter, D Myerscough, L Su, ...
Biochemistry 61 (13), 1337-1350, 2022
72022
Recombination of 2Fe-2S ferredoxins reveals differences in the inheritance of thermostability and midpoint potential
IJ Campbell, D Kahanda, JT Atkinson, ON Sparks, J Kim, CP Tseng, ...
ACS Synthetic Biology 9 (12), 3245-3253, 2020
72020
PERMutation Using Transposase Engineering (PERMUTE): a simple approach for constructing circularly permuted protein libraries
AM Jones, JT Atkinson, JJ Silberg
In Vitro Mutagenesis: Methods and Protocols, 295-308, 2017
72017
Overcoming component limitations in synthetic biology through transposon-mediated protein engineering
JT Atkinson, B Wu, L Segatori, JJ Silberg
Methods in enzymology 621, 191-212, 2019
62019
The biochemical impact of extracting an embedded adenylate kinase domain using circular permutation
T Coleman, J Shin, JJ Silberg, Y Shamoo, JT Atkinson
Biochemistry, 2024
2024
The energetics and evolution of oxidoreductases in deep time
KN McGuinness, N Fehon, R Feehan, M Miller, AC Mutter, LA Rybak, ...
Proteins: Structure, Function, and Bioinformatics 92 (1), 52-59, 2024
2024
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