Judith Klein-Seetharaman

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Valerian KaganProfessor, University of PittsburghVerified email at pitt.edu
Dariush MohammadyaniApplied BioMathVerified email at appliedbiomath.com
Yanjun QiFaculty @UVa CS / PhD @CMU / DATA Scholar@ NIH/ Principal Applied Scientist @ AWSVerified email at virginia.edu
Madhavi GanapathirajuAssociate Professor of Biomedical Informatics and Intelligent Systems, University of PittsburghVerified email at pitt.edu
Alexander StarProfessor of Chemistry and Bioengineering, University of PittsburghVerified email at pitt.edu
Ziv Bar-JosephProfessor of Computational Biology and Machine Learning, School of Computer Science, Carnegie Mellon UniversityVerified email at andrew.cmu.edu
Philip J ReevesBiological Sciences, University of EssexVerified email at essex.ac.uk
Joan Planas-IglesiasMasaryk University, Department of Expermiental Biology, Loschmidt LaboratoriesVerified email at mail.muni.cz
Michele LoewenNational Research Council of CanadaVerified email at nrc.ca
Oznur TastanAssociate Professor, Sabanci UniversityVerified email at sabanciuniv.edu
Christian AltenbachStein Eye Institute, University of California Los AngelesVerified email at ucla.edu
Raj ReddyUniversity Professor of Computer Science and Robotics, Carnegie Mellon UniversityVerified email at cmu.edu
Meghana KshirsagarMicrosoft, AI for GoodVerified email at microsoft.com
Brett AllenReaxis Inc.Verified email at reaxis.com
Arpana DuttaSr. Scientist, Dr. Reddy's LaboratoriesVerified email at case.edu
Jianfei JiangGraduate School of Public Health, Department of Environmental and Occupational Health, University ofVerified email at pitt.edu
Natalia BelikovaAnalytical Services Director, SGS Life Sciences ServicesVerified email at sgs.com
Ivan BudyakEli Lilly and CompanyVerified email at lilly.com
Prof. N. BalakrishnanIndian Institute of ScienceVerified email at serc.iisc.ernet.in
Ivet BaharDirector, Laufer Center for Physical & Quantitative Biology, Stony Brook UniversityVerified email at pitt.edu

Judith Klein-Seetharaman

Arizona State University

Verified email at asu.edu - Homepage

G protein coupled receptors membrane proteins biofeedback


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Oxidized arachidonic and adrenic PEs navigate cells to ferroptosis VE Kagan, G Mao, F Qu, JPF Angeli, S Doll, CS Croix, HH Dar, B Liu, ... Nature chemical biology 13 (1), 81-90, 2017	1615	2017
Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells CT Chu, J Ji, RK Dagda, JF Jiang, YY Tyurina, AA Kapralov, VA Tyurin, ... Nature cell biology 15 (10), 1197-1205, 2013	933	2013
Carbon nanotubes degraded by neutrophil myeloperoxidase induce less pulmonary inflammation VE Kagan, NV Konduru, W Feng, BL Allen, J Conroy, Y Volkov, II Vlasova, ... Nature nanotechnology 5 (5), 354-359, 2010	812	2010
Long-range interactions within a nonnative protein J Klein-Seetharaman, M Oikawa, SB Grimshaw, J Wirmer, E Duchardt, ... Science 295 (5560), 1719-1722, 2002	699	2002
Evaluation of different biological data and computational classification methods for use in protein interaction prediction Y Qi, Z Bar‐Joseph, J Klein‐Seetharaman Proteins: Structure, Function, and Bioinformatics 63 (3), 490-500, 2006	477	2006
The enzymatic oxidation of graphene oxide GP Kotchey, BL Allen, H Vedala, N Yanamala, AA Kapralov, YY Tyurina, ... ACS nano 5 (3), 2098-2108, 2011	413	2011
Mechanistic investigations of horseradish peroxidase-catalyzed degradation of single-walled carbon nanotubes BL Allen, GP Kotchey, Y Chen, NVK Yanamala, J Klein-Seetharaman, ... Journal of the American Chemical Society 131 (47), 17194-17205, 2009	338	2009
A critical assessment of Mus musculusgene function prediction using integrated genomic evidence L Peña-Castillo, M Tasan, CL Myers, H Lee, T Joshi, C Zhang, Y Guan, ... Genome biology 9, 1-19, 2008	297	2008
Random forest similarity for protein-protein interaction prediction from multiple sources Y Qi, J Klein-Seetharaman, Z Bar-Joseph Biocomputing 2005, 531-542, 2005	254	2005
Oxidized lipids block antigen cross-presentation by dendritic cells in cancer W Cao, R Ramakrishnan, VA Tuyrin, F Veglia, T Condamine, A Amoscato, ... The Journal of Immunology 192 (6), 2920-2931, 2014	227	2014
Adsorption of surfactant lipids by single-walled carbon nanotubes in mouse lung upon pharyngeal aspiration AA Kapralov, WH Feng, AA Amoscato, N Yanamala, K Balasubramanian, ... ACS nano 6 (5), 4147-4156, 2012	204	2012
Lipid bodies containing oxidatively truncated lipids block antigen cross-presentation by dendritic cells in cancer F Veglia, VA Tyurin, D Mohammadyani, M Blasi, EK Duperret, ... Nature communications 8 (1), 2122, 2017	203	2017
Identification of core amino acids stabilizing rhodopsin AJ Rader, G Anderson, B Isin, HG Khorana, I Bahar, J Klein-Seetharaman Proceedings of the National Academy of Sciences 101 (19), 7246-7251, 2004	194	2004
Prediction of interactions between HIV-1 and human proteins by information integration O Tastan, Y Qi, JG Carbonell, J Klein-Seetharaman Biocomputing 2009, 516-527, 2009	187	2009
Biodegradation of single‐walled carbon nanotubes by eosinophil peroxidase FT Andón, AA Kapralov, N Yanamala, W Feng, A Baygan, BJ Chambers, ... Small 9 (16), 2721-2729, 2013	186	2013
A mitochondrial pathway for biosynthesis of lipid mediators YY Tyurina, SM Poloyac, VA Tyurin, AA Kapralov, J Jiang, ... Nature chemistry 6 (6), 542-552, 2014	161	2014
Protein complex identification by supervised graph local clustering Y Qi, F Balem, C Faloutsos, J Klein-Seetharaman, Z Bar-Joseph Bioinformatics 24 (13), i250-i268, 2008	159	2008
Protein classification based on text document classification techniques BYM Cheng, JG Carbonell, J Klein‐Seetharaman Proteins: Structure, Function, and Bioinformatics 58 (4), 955-970, 2005	156	2005
Semi-supervised multi-task learning for predicting interactions between HIV-1 and human proteins Y Qi, O Tastan, JG Carbonell, J Klein-Seetharaman, J Weston Bioinformatics 26 (18), i645-i652, 2010	154	2010
NMR spectroscopy in studies of light-induced structural changes in mammalian rhodopsin: Applicability of solution ¹⁹F NMR J Klein-Seetharaman, EV Getmanova, MC Loewen, PJ Reeves, ... Proceedings of the National Academy of Sciences 96 (24), 13744-13749, 1999	147	1999

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