Judith Klein-Seetharaman

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Valerian KaganProfessor, University of PittsburghVerified email at pitt.edu
Dariush MohammadyaniCertaraVerified email at certara.com
Yanjun QiFaculty @UVa CS / PhD @CMU / DATA Scholar@ NIH/ Principal Applied Scientist @ AWSVerified email at virginia.edu
Alexander StarProfessor of Chemistry and Bioengineering, University of PittsburghVerified email at pitt.edu
Madhavi GanapathirajuAssociate Professor of Biomedical Informatics and Intelligent Systems, University of PittsburghVerified email at pitt.edu
Joan Planas-IglesiasMasaryk University, Department of Expermiental Biology, Loschmidt LaboratoriesVerified email at mail.muni.cz
Ziv Bar-JosephProfessor of Computational Biology and Machine Learning, School of Computer Science, Carnegie Mellon UniversityVerified email at andrew.cmu.edu
Philip J ReevesBiological Sciences, University of EssexVerified email at essex.ac.uk
Michele LoewenNational Research Council of CanadaVerified email at nrc.ca
Oznur TastanAssociate Professor, Sabanci UniversityVerified email at sabanciuniv.edu
Christian AltenbachStein Eye Institute, University of California Los AngelesVerified email at ucla.edu
Raj ReddyUniversity Professor of Computer Science and Robotics, Carnegie Mellon UniversityVerified email at cmu.edu
Meghana KshirsagarMicrosoft, AI for GoodVerified email at microsoft.com
Brett AllenReaxis Inc.Verified email at reaxis.com
Arpana DuttaSr. Scientist, Dr. Reddy's LaboratoriesVerified email at case.edu
Jianfei JiangGraduate School of Public Health, Department of Environmental and Occupational Health, University ofVerified email at pitt.edu
Natalia BelikovaAnalytical Services Director, SGS Life Sciences ServicesVerified email at sgs.com
Ivan BudyakEli Lilly and CompanyVerified email at lilly.com
Ivet BaharDirector, Laufer Center for Physical & Quantitative Biology, Stony Brook UniversityVerified email at pitt.edu
AJ RaderDirector of Data Scientist at DMC InsuranceVerified email at dmcinsurance.com

Judith Klein-Seetharaman

Arizona State University

Verified email at asu.edu - Homepage

G protein coupled receptors membrane proteins biofeedback


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Oxidized arachidonic and adrenic PEs navigate cells to ferroptosis VE Kagan, G Mao, F Qu, JPF Angeli, S Doll, CS Croix, HH Dar, B Liu, ... Nature chemical biology 13 (1), 81-90, 2017	2203	2017
Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells CT Chu, J Ji, RK Dagda, JF Jiang, YY Tyurina, AA Kapralov, VA Tyurin, ... Nature cell biology 15 (10), 1197-1205, 2013	1062	2013
Carbon nanotubes degraded by neutrophil myeloperoxidase induce less pulmonary inflammation VE Kagan, NV Konduru, W Feng, BL Allen, J Conroy, Y Volkov, II Vlasova, ... Nature nanotechnology 5 (5), 354-359, 2010	867	2010
Long-range interactions within a nonnative protein J Klein-Seetharaman, M Oikawa, SB Grimshaw, J Wirmer, E Duchardt, ... Science 295 (5560), 1719-1722, 2002	721	2002
Evaluation of different biological data and computational classification methods for use in protein interaction prediction Y Qi, Z Bar‐Joseph, J Klein‐Seetharaman Proteins: Structure, Function, and Bioinformatics 63 (3), 490-500, 2006	502	2006
The enzymatic oxidation of graphene oxide GP Kotchey, BL Allen, H Vedala, N Yanamala, AA Kapralov, YY Tyurina, ... ACS nano 5 (3), 2098-2108, 2011	439	2011
Mechanistic investigations of horseradish peroxidase-catalyzed degradation of single-walled carbon nanotubes BL Allen, GP Kotchey, Y Chen, NVK Yanamala, J Klein-Seetharaman, ... Journal of the American Chemical Society 131 (47), 17194-17205, 2009	352	2009
A critical assessment of Mus musculusgene function prediction using integrated genomic evidence L Peña-Castillo, M Tasan, CL Myers, H Lee, T Joshi, C Zhang, Y Guan, ... Genome biology 9, 1-19, 2008	298	2008
Oxidized lipids block antigen cross-presentation by dendritic cells in cancer W Cao, R Ramakrishnan, VA Tuyrin, F Veglia, T Condamine, A Amoscato, ... The Journal of Immunology 192 (6), 2920-2931, 2014	267	2014
Random forest similarity for protein-protein interaction prediction from multiple sources Y Qi, J Klein-Seetharaman, Z Bar-Joseph Biocomputing 2005, 531-542, 2005	262	2005
Lipid bodies containing oxidatively truncated lipids block antigen cross-presentation by dendritic cells in cancer F Veglia, VA Tyurin, D Mohammadyani, M Blasi, EK Duperret, ... Nature communications 8 (1), 2122, 2017	253	2017
Adsorption of surfactant lipids by single-walled carbon nanotubes in mouse lung upon pharyngeal aspiration AA Kapralov, WH Feng, AA Amoscato, N Yanamala, K Balasubramanian, ... ACS nano 6 (5), 4147-4156, 2012	214	2012
Biodegradation of single‐walled carbon nanotubes by eosinophil peroxidase FT Andón, AA Kapralov, N Yanamala, W Feng, A Baygan, BJ Chambers, ... Small 9 (16), 2721-2729, 2013	195	2013
Identification of core amino acids stabilizing rhodopsin AJ Rader, G Anderson, B Isin, HG Khorana, I Bahar, J Klein-Seetharaman Proceedings of the National Academy of Sciences 101 (19), 7246-7251, 2004	195	2004
Prediction of interactions between HIV-1 and human proteins by information integration O Tastan, Y Qi, JG Carbonell, J Klein-Seetharaman Biocomputing 2009, 516-527, 2009	192	2009
A mitochondrial pathway for biosynthesis of lipid mediators YY Tyurina, SM Poloyac, VA Tyurin, AA Kapralov, J Jiang, ... Nature chemistry 6 (6), 542-552, 2014	171	2014
Protein complex identification by supervised graph local clustering Y Qi, F Balem, C Faloutsos, J Klein-Seetharaman, Z Bar-Joseph Bioinformatics 24 (13), i250-i268, 2008	164	2008
NMR spectroscopy in studies of light-induced structural changes in mammalian rhodopsin: Applicability of solution ¹⁹F NMR J Klein-Seetharaman, EV Getmanova, MC Loewen, PJ Reeves, ... Proceedings of the National Academy of Sciences 96 (24), 13744-13749, 1999	160	1999
Protein classification based on text document classification techniques BYM Cheng, JG Carbonell, J Klein‐Seetharaman Proteins: Structure, Function, and Bioinformatics 58 (4), 955-970, 2005	159	2005
Semi-supervised multi-task learning for predicting interactions between HIV-1 and human proteins Y Qi, O Tastan, JG Carbonell, J Klein-Seetharaman, J Weston Bioinformatics 26 (18), i645-i652, 2010	155	2010

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