Ion Petre

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Grzegorz RozenbergProfessor of Computer Science, Leiden UniversityVerified email at liacs.leidenuniv.nl
Tero HarjuMatematiikan professori, Turun yliopistoVerified email at utu.fi
Eugen CzeizlerUniversity Researcher, University of HelsinkiVerified email at helsinki.fi
Sepinoud AzimiAssistant Professor, Delft University of TechnologyVerified email at tudelft.nl
Vladimir RogojinPostdoc, Åbo AkademiVerified email at vrogojin.net
Cristian GratieTeaching Assistant, University "Politehnica" of BucharestVerified email at cs.pub.ro
Ralph-Johan BackProfessor of Computer Science, Åbo AkademiVerified email at abo.fi
Juhani KarhumäkiProfessor of discrete math onematics, University of TurkuVerified email at utu.fi
Andrzej MizeraPost-doc, University of LuxembourgVerified email at uni.lu
Bogdan IancuUniversity Lecturer, Åbo Akademi UniversityVerified email at abo.fi
John E. ErikssonProfessor in Cell Biology, Åbo Akademi UniversityVerified email at abo.fi
Sergiu IvanovUniversité Grenoble-AlpresVerified email at univ-grenoble-alpes.fr
Luigia PetreAssociate Professor in Computer Science, Åbo Akademi University, FinlandVerified email at abo.fi
Elena CzeizlerResearch Scientist, Varian Medical Systems FiVerified email at varian.com
Artiom AlhazovMoldova State University (Vladimir Andrunachievici Institute of Mathematics and Computer Science)Verified email at math.usm.md
Tseren-Onolt IshdorjMongolian University of Science and TechnologyVerified email at must.edu.mn
Sergey VerlanFull professor in Computer Science, Université Paris Est CréteilVerified email at u-pec.fr
Muhammad Usman SanwalPhD, Computer Science, Mälardalen UniversityVerified email at abo.fi
Robert BrijderEindhoven University of TechnologyVerified email at tue.nl
Luca ManzoniDipartimento di Matematica, Informatica e Geoscienze, Università degli Studi di TriesteVerified email at units.it

Ion Petre

Professor of Mathematics, University of Turku, Finland

Verified email at utu.fi - Homepage

Computational systems biology network science machine learning theory of computing


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Computation in living cells: gene assembly in ciliates A Ehrenfeucht, T Harju, I Petre, D Prescott, G Rozenberg Springer, 2004	200*	2004
Controlling directed protein interaction networks in cancer K Kanhaiya, E Czeizler, C Gratie, I Petre Scientific reports 7 (1), 10327, 2017	81	2017
Formal systems for gene assembly in ciliates A Ehrenfeucht, T Harju, I Petre, DM Prescott, G Rozenberg Theoretical Computer Science 292 (1), 199-219, 2003	81	2003
A simple mass-action model for the eukaryotic heat shock response and its mathematical validation I Petre, A Mizera, CL Hyder, A Meinander, A Mikhailov, RI Morimoto, ... Natural Computing 10, 595-612, 2011	78	2011
Parikh matrices and amiable words A Atanasiu, R Atanasiu, I Petre Theoretical Computer Science 390 (1), 102-109, 2008	75	2008
Reaction system models for the heat shock response S Azimi, B Iancu, I Petre Fundamenta Informaticae 131 (3-4), 299-312, 2014	68	2014
String and graph reduction systems for gene assembly in ciliates A Ehrenfeucht, I Petre, DM Prescott, G Rozenberg Mathematical Structures in Computer Science 12 (2), 113-134, 2002	67	2002
Universal and simple operations for gene assembly in ciliates A Ehrenfeucht, I Petre, DM Prescott, G Rozenberg Where Mathematics, Computer Science, Linguistics and Biology Meet: Essays in …, 2001	64	2001
Structural target controllability of linear networks E Czeizler, KC Wu, C Gratie, K Kanhaiya, I Petre IEEE/ACM Transactions on Computational Biology and Bioinformatics 15 (4 …, 2018	58*	2018
Algebraic systems and pushdown automata I Petre, A Salomaa Handbook of Weighted Automata, 257-289, 2009	54	2009
Conway's problem for three-word sets J Karhumäki, I Petre Theoretical Computer Science 289 (1), 705-725, 2002	53*	2002
Parallelism in gene assembly T Harju, C Li, I Petre, G Rozenberg Natural Computing 5, 203-223, 2006	42	2006
Tailored approaches in drug development and diagnostics: from molecular design to biological model systems C Sahlgren, A Meinander, H Zhang, F Cheng, M Preis, C Xu, TA Salminen, ... Advanced Healthcare Materials 6 (21), 1700258, 2017	41	2017
Characterizing the micronuclear gene patterns in ciliates A Ehrenfeucht, T Harju, I Petre, G Rozenberg Theory of Computing Systems 35, 501-519, 2002	41	2002
Commutation with codes J Karhumäki, M Latteux, I Petre Theoretical computer science 340 (2), 322-333, 2005	40*	2005
Dependency graphs and mass conservation in reaction systems S Azimi, C Gratie, S Ivanov, I Petre Theoretical Computer Science 598, 23-39, 2015	39	2015
Circularity and other invariants of gene assembly in ciliates A Ehrenfeucht, I Petre, DM Prescott, G Rozenberg Words, Semigroups, And Transductions: Festschrift in Honor of Gabriel …, 2001	39	2001
A normal form for P-systems I Petre Bulletin of the EATCS 67, 165-172, 1999	38	1999
Reaction systems: a model of computation inspired by the functioning of the living cell A Ehrenfeucht, I Petre, G Rozenberg The role of theory in computer science: Essays dedicated to Janusz …, 2017	36	2017
Complexity of model checking for reaction systems S Azimi, C Gratie, S Ivanov, L Manzoni, I Petre, AE Porreca Theoretical Computer Science 623, 103-113, 2016	36	2016

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