| Identification of a central role for complement in osteoarthritis Q Wang, AL Rozelle, CM Lepus, CR Scanzello, JJ Song, DM Larsen, ... Nature medicine 17 (12), 1674-1679, 2011 | 641 | 2011 |
| DA DA: Degree-Aware Algorithms for Network-Based Disease Gene Prioritization S Erten, G Bebek, RM Ewing, M Koyutürk BioData mining 4, 1-20, 2011 | 186 | 2011 |
| Quantitative H2S-mediated protein sulfhydration reveals metabolic reprogramming during the integrated stress response XH Gao, D Krokowski, BJ Guan, I Bederman, M Majumder, M Parisien, ... elife 4, e10067, 2015 | 179 | 2015 |
| FOXA1 represses the molecular phenotype of basal breast cancer cells GM Bernardo, G Bebek, CL Ginther, ST Sizemore, KL Lozada, JD Miedler, ... Oncogene 32 (5), 554-563, 2013 | 177 | 2013 |
| Proteomic analysis of synovial fluid from the osteoarthritic knee: comparison with transcriptome analyses of joint tissues SY Ritter, R Subbaiah, G Bebek, J Crish, CR Scanzello, B Krastins, ... Arthritis & Rheumatism 65 (4), 981-992, 2013 | 161 | 2013 |
| PathFinder: mining signal transduction pathway segments from protein-protein interaction networks G Bebek, J Yang BMC bioinformatics 8, 1-13, 2007 | 156 | 2007 |
| Hypoxic induction of vasorin regulates Notch1 turnover to maintain glioma stem-like cells J Man, X Yu, H Huang, W Zhou, C Xiang, H Huang, L Miele, Z Liu, ... Cell stem cell 22 (1), 104-118. e6, 2018 | 150 | 2018 |
| Germline mutations in MSR1, ASCC1, and CTHRC1 in patients with Barrett esophagus and esophageal adenocarcinoma M Orloff, C Peterson, X He, S Ganapathi, B Heald, Y Yang, G Bebek, ... JAmA 306 (4), 410-419, 2011 | 145 | 2011 |
| Microbiomic differences in tumor and paired-normal tissue in head and neck squamous cell carcinomas H Wang, P Funchain, G Bebek, J Altemus, H Zhang, F Niazi, C Peterson, ... Genome medicine 9, 1-10, 2017 | 119 | 2017 |
| Vavien: An Algorithm for Prioritizing Candidate Disease Genes Based on Topological Similarity of Proteins in Interaction Networks S Erten, G Bebek, M Koyutürk Journal of computational biology 18 (11), 1561-1574, 2011 | 110 | 2011 |
| PARP1 is up-regulated in non-small cell lung cancer tissues in the presence of the cyanobacterial toxin microcystin PL Apopa, L Alley, RB Penney, K Arnaoutakis, MA Steliga, S Jeffus, ... Frontiers in microbiology 9, 1757, 2018 | 90 | 2018 |
| Specific kinesin expression profiles associated with taxane resistance in basal-like breast cancer MH Tan, S De, G Bebek, MS Orloff, R Wesolowski, E Downs-Kelly, ... Breast cancer research and treatment 131, 849-858, 2012 | 73 | 2012 |
| The degree distribution of the generalized duplication model G Bebek, P Berenbrink, C Cooper, T Friedetzky, J Nadeau, SC Sahinalp Theoretical Computer Science 369 (1-3), 239-249, 2006 | 71 | 2006 |
| Microbiomic subprofiles and MDR1 promoter methylation in head and neck squamous cell carcinoma G Bebek, KL Bennett, P Funchain, R Campbell, R Seth, J Scharpf, ... Human molecular genetics 21 (7), 1557-1565, 2012 | 69 | 2012 |
| Network biology methods integrating biological data for translational science G Bebek, M Koyutürk, ND Price, MR Chance Briefings in bioinformatics 13 (4), 446-459, 2012 | 67 | 2012 |
| Neural transcriptome of constitutional Pten dysfunction in mice and its relevance to human idiopathic autism spectrum disorder AK Tilot, G Bebek, F Niazi, JB Altemus, T Romigh, TW Frazier, C Eng Molecular psychiatry 21 (1), 118-125, 2016 | 56 | 2016 |
| Integrated analysis reveals critical genomic regions in prostate tumor microenvironment associated with clinicopathologic phenotypes S Ashida, MS Orloff, G Bebek, L Zhang, P Zheng, DM Peehl, C Eng Clinical Cancer Research 18 (6), 1578-1587, 2012 | 48 | 2012 |
| Phylogenetic analysis of modularity in protein interaction networks S Erten, X Li, G Bebek, J Li, M Koyutürk BMC bioinformatics 10, 1-14, 2009 | 48 | 2009 |
| Chromosome 3 status in uveal melanoma: a comparison of fluorescence in situ hybridization and single-nucleotide polymorphism array AD Singh, ME Aronow, Y Sun, G Bebek, Y Saunthararajah, ... Investigative ophthalmology & visual science 53 (7), 3331-3339, 2012 | 43 | 2012 |
| Hypomethylation of the MMP7 promoter and increased expression of MMP7 distinguishes the basal-like breast cancer subtype from other triple-negative tumors ST Sizemore, GM Sizemore, CN Booth, CL Thompson, P Silverman, ... Breast cancer research and treatment 146, 25-40, 2014 | 39 | 2014 |
Mark ChanceCase Western Reserve UniversityVerified email at case.edu
