| OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data HL Röst, G Rosenberger, P Navarro, L Gillet, SM Miladinović, ... Nature biotechnology 32 (3), 219-223, 2014 | 792 | 2014 |
| A repository of assays to quantify 10,000 human proteins by SWATH-MS G Rosenberger, CC Koh, T Guo, HL Röst, P Kouvonen, BC Collins, ... Scientific data 1 (1), 1-15, 2014 | 429 | 2014 |
| Building high-quality assay libraries for targeted analysis of SWATH MS data OT Schubert, LC Gillet, BC Collins, P Navarro, G Rosenberger, WE Wolski, ... Nature protocols 10 (3), 426-441, 2015 | 347 | 2015 |
| Genome-wide mapping of transcriptional start sites defines an extensive leaderless transcriptome in Mycobacterium tuberculosis T Cortes, OT Schubert, G Rose, KB Arnvig, I Comas, R Aebersold, ... Cell reports 5 (4), 1121-1131, 2013 | 321 | 2013 |
| Quantitative proteomics: challenges and opportunities in basic and applied research OT Schubert, HL Röst, BC Collins, G Rosenberger, R Aebersold Nature protocols 12 (7), 1289-1294, 2017 | 289 | 2017 |
| The in silico human surfaceome D Bausch-Fluck, U Goldmann, S Müller, M van Oostrum, M Müller, ... Proceedings of the National Academy of Sciences 115 (46), E10988-E10997, 2018 | 261 | 2018 |
| Cancer genetics-guided discovery of serum biomarker signatures for diagnosis and prognosis of prostate cancer I Cima, R Schiess, P Wild, M Kaelin, P Schüffler, V Lange, P Picotti, ... Proceedings of the National Academy of Sciences 108 (8), 3342-3347, 2011 | 223 | 2011 |
| Absolute proteome composition and dynamics during dormancy and resuscitation of Mycobacterium tuberculosis OT Schubert, C Ludwig, M Kogadeeva, M Zimmermann, G Rosenberger, ... Cell host & microbe 18 (1), 96-108, 2015 | 220 | 2015 |
| The Mtb proteome library: a resource of assays to quantify the complete proteome of Mycobacterium tuberculosis OT Schubert, J Mouritsen, C Ludwig, HL Röst, G Rosenberger, PK Arthur, ... Cell host & microbe 13 (5), 602-612, 2013 | 205 | 2013 |
| From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions M Mori, Z Zhang, A Banaei‐Esfahani, JB Lalanne, H Okano, BC Collins, ... Molecular systems biology 17 (5), e9536, 2021 | 85 | 2021 |
| Breast cancer classification based on proteotypes obtained by SWATH mass spectrometry P Bouchal, OT Schubert, J Faktor, L Capkova, H Imrichova, K Zoufalova, ... Cell reports 28 (3), 832-843. e7, 2019 | 83 | 2019 |
| A RanGTP-independent mechanism allows ribosomal protein nuclear import for ribosome assembly S Schütz, U Fischer, M Altvater, P Nerurkar, C Peña, M Gerber, Y Chang, ... Elife 3, e03473, 2014 | 73 | 2014 |
| Comparative 'omics analyses differentiate Mycobacterium tuberculosis and Mycobacterium bovis and reveal distinct macrophage responses to infection with the … KM Malone, K Rue-Albrecht, DA Magee, K Conlon, OT Schubert, ... Microbial genomics 4 (3), e000163, 2018 | 63 | 2018 |
| Systems-level proteomics of two ubiquitous leaf commensals reveals complementary adaptive traits for phyllosphere colonization DB Müller, OT Schubert, H Röst, R Aebersold, JA Vorholt Molecular & Cellular Proteomics 15 (10), 3256-3269, 2016 | 59 | 2016 |
| Automated SWATH data analysis using targeted extraction of ion chromatograms HL Röst, R Aebersold, OT Schubert Proteomics, 289-307, 2017 | 52 | 2017 |
| A Small RNA Encoded in the Rv2660c Locus of Mycobacterium tuberculosis Is Induced during Starvation and Infection J Houghton, T Cortes, O Schubert, G Rose, A Rodgers, M De Ste Croix, ... PloS one 8 (12), e80047, 2013 | 46 | 2013 |
| Delayed effects of transcriptional responses in Mycobacterium tuberculosis exposed to nitric oxide suggest other mechanisms involved in survival T Cortes, OT Schubert, A Banaei-Esfahani, BC Collins, R Aebersold, ... Scientific reports 7 (1), 8208, 2017 | 45 | 2017 |
| Updated reference genome sequence and annotation of Mycobacterium bovis AF2122/97 KM Malone, D Farrell, TP Stuber, OT Schubert, R Aebersold, ... Genome announcements 5 (14), 10.1128/genomea. 00157-17, 2017 | 45 | 2017 |
| The GTPase Nog1 co-ordinates the assembly, maturation and quality control of distant ribosomal functional centers P Klingauf-Nerurkar, LC Gillet, D Portugal-Calisto, M Oborská-Oplová, ... Elife 9, e52474, 2020 | 44* | 2020 |
| Integrating highly quantitative proteomics and genome-scale metabolic modeling to study pH adaptation in the human pathogen Enterococcus faecalis R Großeholz, CC Koh, N Veith, T Fiedler, M Strauss, B Olivier, BC Collins, ... NPJ systems biology and applications 2 (1), 1-9, 2016 | 29 | 2016 |
Aebersold RETH ZurichVerified email at imsb.biol.ethz.ch
