| Integration of external signaling pathways with the core transcriptional network in embryonic stem cells X Chen, H Xu, P Yuan, F Fang, M Huss, VB Vega, E Wong, YL Orlov, ... Cell 133 (6), 1106-1117, 2008 | 2861 | 2008 |
| Assessment of CASP7 structure predictions for template free targets R Jauch, HC Yeo, PR Kolatkar, ND Clarke Proteins: Structure, Function, and Bioinformatics 69 (S8), 57-67, 2007 | 163 | 2007 |
| Mammalian systems biotechnology reveals global cellular adaptations in a recombinant CHO cell line FNK Yusufi, M Lakshmanan, YS Ho, BLW Loo, P Ariyaratne, Y Yang, ... Cell systems 4 (5), 530-542. e6, 2017 | 88 | 2017 |
| Mechanistic elements and critical factors of cellular reprogramming revealed by stepwise global gene expression analyses SJ Park, HC Yeo, NY Kang, H Kim, J Lin, HH Ha, M Vendrell, JS Lee, ... Stem Cell Research 12 (3), 730-741, 2014 | 43 | 2014 |
| Enzyme capacity-based genome scale modelling of CHO cells HC Yeo, J Hong, M Lakshmanan, DY Lee Metabolic Engineering 60, 138-147, 2020 | 40 | 2020 |
| Enhanced production of neuroprogenitors, dopaminergic neurons, and identification of target genes by overexpression of sonic hedgehog in human embryonic stem cells SM Wu, KS Tan, H Chen, TT Beh, HC Yeo, SKL Ng, S Wei, DY Lee, ... Stem cells and development 21 (5), 729-741, 2012 | 30 | 2012 |
| Integrated transcriptome and binding sites analysis implicates E2F in the regulation of self-renewal in human pluripotent stem cells HC Yeo, TT Beh, JJL Quek, G Koh, KKK Chan, DY Lee PLoS One 6 (11), e27231, 2011 | 25 | 2011 |
| Patterns of cis-element enrichment reveal potential regulatory modules involved in the transcriptional regulation of anoxia response of japonica rice B Mohanty, V Herath, E Wijaya, HC Yeo, BG de Los Reyes, DY Lee Gene 511 (2), 235-242, 2012 | 22 | 2012 |
| WEbcoli: an interactive and asynchronous web application for in silico design and analysis of genome-scale E.coli model TS Jung, HC Yeo, SG Reddy, WS Cho, DY Lee Bioinformatics 25 (21), 2850-2852, 2009 | 18 | 2009 |
| Precursor mass prediction by clustering ionization products in LC-MS-based metabolomics TS Lee, YS Ho, HC Yeo, JPY Lin, DY Lee Metabolomics 9, 1301-1310, 2013 | 16 | 2013 |
| In silico model-based characterization of metabolic response to harsh sparging stress in fed-batch CHO cell cultures JK Hong, HC Yeo, M Lakshmanan, S Han, HM Cha, M Han, DY Lee Journal of biotechnology 308, 10-20, 2020 | 9 | 2020 |
| An LC–MS-based lipidomics pre-processing framework underpins rapid hypothesis generation towards CHO systems biotechnology HC Yeo, S Chen, YS Ho, DY Lee Metabolomics 14, 1-13, 2018 | 7 | 2018 |
| Genome-wide transcriptome and binding sites analyses identify early FOX expressions for enhancing cardiomyogenesis efficiency of hESC cultures HC Yeo, S Ting, RM Brena, G Koh, A Chen, SQ Toh, YM Lim, SKW Oh, ... Scientific Reports 6 (1), 1-14, 2016 | 7 | 2016 |
| Combined multivariate statistical and flux balance analyses uncover media bottlenecks to the growth and productivity of Chinese hamster ovary cell cultures HC Yeo, SY Park, T Tan, SK Ng, M Lakshmanan, DY Lee Biotechnology and Bioengineering 119 (7), 1740-1754, 2022 | 6 | 2022 |
| A genetic algorithm-based approach for pre-processing metabolomics and lipidomics LC–MS data HC Yeo, BKS Chung, W Chong, JX Chin, KS Ang, M Lakshmanan, YS Ho, ... Metabolomics 12, 1-13, 2016 | 6 | 2016 |
| Inferring transcription factor targets from gene expression changes and predicted promoter occupancy ZX Yeo, HC Yeo, JKS Yeo, AL Yeo, Y Li, ND Clarke Journal of Computational Biology 16 (2), 357-368, 2009 | 6 | 2009 |
| Metabolomics and modelling approaches for systems metabolic engineering JK Khanijou, H Kulyk, C Bergès, LW Khoo, P Ng, HC Yeo, M Helmy, ... Metabolic Engineering Communications, e00209, 2022 | 4 | 2022 |
| Integrative metabolomic analysis reveals diet supplementation with green tea alleviates UVB-damaged mouse skin correlated with ascorbate metabolism and urea cycle ES Jung, HM Park, SM Hyun, JC Shon, M Lakshmanan, M Noh, HC Yeo, ... Metabolomics 13, 1-14, 2017 | 4 | 2017 |
| Inferring direct regulatory targets of a transcription factor in the DREAM2 challenge VB Vega, XY Woo, H Hamidi, HC Yeo, ZX Yeo, G Bourque, ND Clarke Annals of the New York Academy of Sciences 1158 (1), 215-223, 2009 | 3 | 2009 |
| Machine learning alternative to systems biology should not solely depend on data HC Yeo, K Selvarajoo Briefings in Bioinformatics 23 (6), bbac436, 2022 | 1 | 2022 |
