Biclustering methods: biological relevance and application in gene expression analysis A Oghabian, S Kilpinen, S Hautaniemi, E Czeizler PloS one 9 (3), e90801, 2014 | 139 | 2014 |
On a special class of primitive words E Czeizler, L Kari, S Seki Theoretical Computer Science 411 (3), 617-630, 2010 | 60 | 2010 |
A Short Survey on Watson-Crick Automata. E Czeizler, E Czeizler Bull. EATCS 88 (3), 104-119, 2006 | 56 | 2006 |
On the descriptional complexity of Watson–Crick automata E Czeizler, E Czeizler, L Kari, K Salomaa Theoretical Computer Science 410 (35), 3250-3260, 2009 | 43* | 2009 |
Synthetic Transcription Amplifier System for Orthogonal Control of Gene Expression in Saccharomyces cerevisiae A Rantasalo, E Czeizler, R Virtanen, J Rousu, H Lähdesmäki, M Penttilä, ... PLoS One 11 (2), e0148320, 2016 | 42 | 2016 |
An extension of the Lyndon–Schützenberger result to pseudoperiodic words E Czeizler, E Czeizler, L Kari, S Seki Information and Computation 209 (4), 717-730, 2011 | 27 | 2011 |
Quantitative Refinement of Reaction Models. B Iancu, E Czeizler, E Czeizler, I Petre International Journal of Unconventional Computing 8, 2012 | 25 | 2012 |
Watson-Crick ω-automata E Petre Journal of Automata, Languages and Combinatorics 8 (1), 59-70, 2003 | 21 | 2003 |
Parallel communicating Watson-Crick automata systems E Czeizler, E Czeizler Acta Cybernetica 17 (4), 685-700, 2006 | 20 | 2006 |
On non-periodic solutions of independent systems of word equations over three unknowns E Czeizler, J Karhumäki International Journal of Foundations of Computer Science 18 (04), 873-897, 2007 | 18 | 2007 |
Quantitative analysis of the self-assembly strategies of intermediate filaments from tetrameric vimentin E Czeizler, A Mizera, E Czeizler, RJ Back, JE Eriksson, I Petre IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (3), 885-898, 2011 | 17 | 2011 |
On the power of parallel communicating Watson–Crick automata systems E Czeizler, E Czeizler Theoretical Computer Science 358 (1), 142-147, 2006 | 17 | 2006 |
The non-parametrizability of the word equation xyz= zvx: A short proof E Czeizler Theoretical computer science 345 (2-3), 296-303, 2005 | 13* | 2005 |
A graph-theoretical approach for motif discovery in protein sequences E Czeizler, T Hirvola, K Karhu IEEE/ACM transactions on computational biology and bioinformatics 14 (1 …, 2015 | 10 | 2015 |
Intricacies of simple word equations: An example E Czeizler, Š Holub, J Karhumäki, M Laine International Journal of Foundations of Computer Science 18 (06), 1167-1175, 2007 | 10 | 2007 |
Quantitative model refinement as a solution to the combinatorial size explosion of biomodels E Czeizler, E Czeizler, B Iancu, I Petre Electronic Notes in Theoretical Computer Science 284, 35-53, 2012 | 7 | 2012 |
On systems of word equations over three unknowns with at most six occurrences of one of the unknowns E Czeizler, W Plandowski Theoretical computer science 410 (30-32), 2889-2909, 2009 | 7 | 2009 |
One Dimensional DNA Tiles Self Assembly Model Simulation. A Amarioarei, G Barad, E Czeizler, E Czeizler, ANA DOBRE, C Itcus, ... International Journal of Unconventional Computing 13, 2018 | 6 | 2018 |
Computational modelling of the kinetic Tile Assembly Model using a rule-based approach A Mohammed, E Czeizler, E Czeizler Theoretical Computer Science 701, 203-215, 2017 | 6 | 2017 |
Multiple constraints on three and four words E Czeizler Theoretical computer science 391 (1-2), 14-19, 2008 | 5 | 2008 |