Colin Worby
Colin Worby
Broad Institute
Verified email at broadinstitute.org
Title
Cited by
Cited by
Year
Within-host bacterial diversity hinders accurate reconstruction of transmission networks from genomic distance data
CJ Worby, M Lipsitch, WP Hanage
PLoS Comput Biol 10 (3), e1003549, 2014
1172014
On the relative role of different age groups in influenza epidemics
CJ Worby, SS Chaves, J Wallinga, M Lipsitch, L Finelli, E Goldstein
Epidemics 13, 10-16, 2015
522015
Shared genomic variants: identification of transmission routes using pathogen deep-sequence data
CJ Worby, M Lipsitch, WP Hanage
American journal of epidemiology 186 (10), 1209-1216, 2017
452017
Reconstructing transmission trees for communicable diseases using densely sampled genetic data
CJ Worby, PD O'Neill, T Kypraios, JV Robotham, D De Angelis, ...
The annals of applied statistics 10 (1), 395, 2016
432016
THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites
HH Chang, CJ Worby, A Yeka, J Nankabirwa, MR Kamya, SG Staedke, ...
PLoS computational biology 13 (1), e1005348, 2017
412017
Estimating the Effectiveness of Isolation and Decolonization Measures in Reducing Transmission of Methicillin-resistant Staphylococcus aureus in Hospital General …
CJ Worby, D Jeyaratnam, JV Robotham, T Kypraios, PD O'neill, ...
American journal of epidemiology 177 (11), 1306-1313, 2013
412013
Estimating the Effectiveness of Isolation and Decolonization Measures in Reducing Transmission of Methicillin-resistant Staphylococcus aureus in Hospital General …
CJ Worby, D Jeyaratnam, JV Robotham, T Kypraios, PD O'neill, ...
American journal of epidemiology 177 (11), 1306-1313, 2013
412013
Microbial genomics of ancient plagues and outbreaks
CP Andam, CJ Worby, Q Chang, MG Campana
Trends in microbiology 24 (12), 978-990, 2016
382016
Impact of mupirocin resistance on the transmission and control of healthcare-associated MRSA
SR Deeny, CJ Worby, O Tosas Auguet, BS Cooper, J Edgeworth, ...
Journal of Antimicrobial Chemotherapy 70 (12), 3366-3378, 2015
332015
The distribution of pairwise genetic distances: a tool for investigating disease transmission
CJ Worby, HH Chang, WP Hanage, M Lipsitch
Genetics 198 (4), 1395-1404, 2014
332014
Bayesian reconstruction of transmission within outbreaks using genomic variants
N De Maio, CJ Worby, DJ Wilson, N Stoesser
PLoS computational biology 14 (4), e1006117, 2018
272018
Identifying the effect of patient sharing on between-hospital genetic differentiation of methicillin-resistant Staphylococcus aureus
HH Chang, J Dordel, T Donker, CJ Worby, EJ Feil, WP Hanage, ...
Genome medicine 8 (1), 1-10, 2016
202016
Penicillin resistance of nonvaccine type pneumococcus before and after PCV13 introduction, United States
CP Andam, CJ Worby, R Gierke, L McGee, T Pilishvili, WP Hanage
Emerging infectious diseases 23 (6), 1012, 2017
162017
On the relative role of different age groups during epidemics associated with respiratory syncytial virus
E Goldstein, HH Nguyen, P Liu, C Viboud, CA Steiner, CJ Worby, ...
The Journal of infectious diseases 217 (2), 238-244, 2018
152018
Examining the role of different age groups, and of vaccination during the 2012 Minnesota pertussis outbreak
CJ Worby, C Kenyon, R Lynfield, M Lipsitch, E Goldstein
Scientific reports 5, 13182, 2015
142015
'SEEDY'(Simulation of Evolutionary and Epidemiological Dynamics): An R Package to Follow Accumulation of Within-Host Mutation in Pathogens
CJ Worby, TD Read
PloS one 10 (6), e0129745, 2015
132015
Statistical inference and modelling for nosocomial infections and the incorporation of whole genome sequence data
CJ Worby
University of Nottingham, 2013
52013
On the relative role of different age groups in influenza epidemics. Epidemics. 2015; 13: 10–16
CJ Worby, SS Chaves, J Wallinga, M Lipsitch, L Finelli, E Goldstein
5
On the role of different age groups and pertussis vaccines during the 2012 outbreak in Wisconsin
E Goldstein, CJ Worby, M Lipsitch
Open Forum Infectious Diseases 5 (5), ofy082, 2018
32018
Population effect of influenza vaccination under co-circulation of non-vaccine variants and the case for a bivalent A/H3N2 vaccine component
CJ Worby, J Wallinga, M Lipsitch, E Goldstein
Epidemics 19, 74-82, 2017
22017
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Articles 1–20