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Lauren Mak
Lauren Mak
Weill Cornell Medical College
Verified email at med.cornell.edu - Homepage
Title
Cited by
Cited by
Year
A global metagenomic map of urban microbiomes and antimicrobial resistance
D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ...
Cell 184 (13), 3376-3393. e17, 2021
231*2021
Reconstruction of microbial haplotypes by integration of statistical and physical linkage in scaffolding
C Cao, J He, L Mak, D Perera, D Kwok, J Wang, M Li, T Mourier, ...
Molecular Biology and Evolution, 2021
122021
Evaluation of a phylogenetic pipeline to examine transmission networks in a Canadian HIV Cohort
L Mak, D Perera, R Lang, P Kossinna, J He, MJ Gill, Q Long, G van Marle
Microorganisms 8 (2), 196, 2020
92020
PRESM: personalized reference editor for somatic mutation discovery in cancer genomics
C Cao, L Mak, G Jin, P Gordon, K Ye, Q Long
Bioinformatics 35 (9), 1445-1452, 2019
62019
Ariadne: Barcoded linked-read deconvolution using de bruijn graphs
L Mak, D Meleshko, DC Danko, WN Barakzai, N Belchikov, I Hajirasouliha
BioRxiv, 2021.05. 09.443255, 2021
22021
De novo reconstruction of microbial haplotypes by integrating statistical and physical linkage
C Cao, J He, L Mak, D Perera, D Kwok, J Wang, M Li, T Mourier, ...
Cold Spring Harbor Laboratory, 2020
12020
Ariadne: synthetic long read deconvolution using assembly graphs
L Mak, D Meleshko, DC Danko, WN Barakzai, S Maharjan, N Belchikov, ...
Genome Biology 24 (1), 197, 2023
2023
A modular metagenomics analysis system for integrated multi-step data exploration
L Mak, B Tierney, C Ronkowski, M Toomey, JSA Martinez, S Zimmerman, ...
bioRxiv, 2023
2023
Resolving Complex Microbial Populations and Transmission Networks Through Haplotype Reconstruction
L Mak
2019
SimPEL: Simulation‐based power estimation for sequencing studies of low‐prevalence conditions
L Mak, M Li, C Cao, P Gordon, M Tarailo‐Graovac, C Bousman, P Wang, ...
Genetic epidemiology 42 (5), 480-487, 2018
2018
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Articles 1–10