MusiteDeep: a deep-learning framework for general and kinase-specific phosphorylation site prediction D Wang, S Zeng, C Xu, W Qiu, Y Liang, T Joshi, D Xu Bioinformatics 33 (24), 3909-3916, 2017 | 225 | 2017 |
P3DB 3.0: from plant phosphorylation sites to protein networks Q Yao, H Ge, S Wu, N Zhang, W Chen, C Xu, J Gao, JJ Thelen, D Xu Nucleic Acids Research 42 (D1), D1206-D1213, 2014 | 78 | 2014 |
Computational prediction of ubiquitination proteins using evolutionary profiles and functional domain annotation W Qiu, C Xu, X Xiao, D Xu Current genomics 20 (5), 389-399, 2019 | 11 | 2019 |
Evolutionary dynamics of indels in SARS-CoV-2 spike glycoprotein RSP Rao, N Ahsan, C Xu, L Su, J Verburgt, L Fornelli, D Kihara, D Xu Evolutionary Bioinformatics 17, 11769343211064616, 2021 | 10 | 2021 |
Dimension-agnostic and granularity-based spatially variable gene identification using BSP J Wang, J Li, ST Kramer, L Su, Y Chang, C Xu, MT Eadon, K Kiryluk, Q Ma, ... Nature Communications 14 (1), 7367, 2023 | 5 | 2023 |
Sucrose induces rapid activation of CfSAPK, a mitogen‐activated protein kinase, in Cephalostachyum fuchsianum Gamble cells L Li, Y Li, L Zhang, C Xu, T Su, D Ren, H Yang Plant, Cell & Environment 35 (8), 1428-1439, 2012 | 5 | 2012 |
Dimension-agnostic and granularity-based spatially variable gene identification J Wang, J Li, S Kramer, L Su, Y Chang, C Xu, Q Ma, D Xu Research Square, 2023 | 3 | 2023 |
Large-scale integrative analysis of soybean transcriptome using an unsupervised autoencoder model L Su, C Xu, S Zeng, L Su, T Joshi, G Stacey, D Xu Frontiers in Plant Science 13, 831204, 2022 | 1 | 2022 |
Unveiling orphan receptor-like kinases in plants: novel client discovery using high-confidence library predictions in the Kinase–Client (KiC) assay GL Jorge, D Kim, C Xu, SH Cho, L Su, D Xu, LE Bartley, G Stacey, ... Frontiers in Plant Science 15, 1372361, 2024 | | 2024 |
Evolutionary dynamics of indels in SARS-CoV-2 spike glycoprotein (preprint) RSP Rao, N Ahsan, C Xu, L Su, J Verburgt, L Fornelli, D Kihara, D Xu | | 2021 |
Computational prediction of ubiquitination protein using evolutionary profiles and functional domains CH Xu, WR Qiu, X Xiao, D Xu 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2017 | | 2017 |