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| Assessment of transcript reconstruction methods for RNA-seq T Steijger, JF Abril, PG Engström, F Kokocinski, TJ Hubbard, R Guigó, ... Nature methods 10 (12), 1177-1184, 2013 | 792 | 2013 |
| The lncRNA Malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult B Zhang, G Arun, YS Mao, Z Lazar, G Hung, G Bhattacharjee, X Xiao, ... Cell reports 2 (1), 111-123, 2012 | 648 | 2012 |
| SRSF1-Regulated Alternative Splicing in Breast Cancer O Anczuków, M Akerman, A Cléry, J Wu, C Shen, NH Shirole, A Raimer, ... Molecular Cell 60 (1), 105-117, 2015 | 346 | 2015 |
| Single cell sequencing reveals low levels of aneuploidy across mammalian tissues KA Knouse, J Wu, CA Whittaker, A Amon Proceedings of the National Academy of Sciences 111 (37), 13409-13414, 2014 | 339 | 2014 |
| Systematic discovery of regulated and conserved alternative exons in the mammalian brain reveals NMD modulating chromatin regulators Q Yan, SM Weyn-Vanhentenryck, J Wu, SA Sloan, Y Zhang, K Chen, ... Proceedings of the National Academy of Sciences 112 (11), 3445-3450, 2015 | 167 | 2015 |
| Ordered and deterministic cancer genome evolution after p53 loss T Baslan, JP Morris IV, Z Zhao, J Reyes, YJ Ho, KM Tsanov, J Bermeo, ... Nature 608 (7924), 795-802, 2022 | 164 | 2022 |
| OLego: fast and sensitive mapping of spliced mRNA-Seq reads using small seeds J Wu, O Anczuków, AR Krainer, MQ Zhang, C Zhang Nucleic acids research 41 (10), 5149-5163, 2013 | 151 | 2013 |
| SpliceTrap: a method to quantify alternative splicing under single cellular conditions J Wu, M Akerman, S Sun, WR McCombie, AR Krainer, MQ Zhang Bioinformatics 27 (21), 3010-3016, 2011 | 119 | 2011 |
| Assessment of megabase-scale somatic copy number variation using single cell sequencing KA Knouse, J Wu, A Amon Genome Research, gr. 198937.115, 2016 | 117 | 2016 |
| DAZL Limits Pluripotency, Differentiation, and Apoptosis in Developing Primordial Germ Cells HH Chen, M Welling, DB Bloch, J Muñoz, E Mientjes, X Chen, C Tramp, ... Stem cell reports 3 (5), 892-904, 2014 | 108 | 2014 |
| Comparative genomics and transcriptomics of Pichia pastoris KR Love, KA Shah, CA Whittaker, J Wu, MC Bartlett, D Ma, RL Leeson, ... BMC genomics 17, 1-17, 2016 | 105 | 2016 |
| Chd5 orchestrates chromatin remodelling during sperm development W Li, J Wu, SY Kim, M Zhao, SA Hearn, MQ Zhang, ML Meistrich, AA Mills Nature communications 5 (1), 3812, 2014 | 101 | 2014 |
| Novel insights into breast cancer copy number genetic heterogeneity revealed by single-cell genome sequencing T Baslan, J Kendall, K Volyanskyy, K McNamara, H Cox, S D'Italia, ... Elife 9, e51480, 2020 | 70 | 2020 |
| Direct cloning of double-stranded RNAs from RNase protection analysis reveals processing patterns of C/D box snoRNAs and provides evidence for widespread antisense transcript … M Shen, E Eyras, J Wu, A Khanna, S Josiah, M Rederstorff, MQ Zhang, ... Nucleic acids research 39 (22), 9720-9730, 2011 | 53 | 2011 |
| Distinct and predictive histone lysine acetylation patterns at promoters, enhancers, and gene bodies N Rajagopal, J Ernst, P Ray, J Wu, M Zhang, M Kellis, B Ren G3: Genes| Genomes| Genetics 4 (11), 2051-2063, 2014 | 45 | 2014 |
| Next-generation sequencing reveals the biological significance of the N 2,3-ethenoguanine lesion in vivo S Chang, BI Fedeles, J Wu, JC Delaney, D Li, L Zhao, PP Christov, E Yau, ... Nucleic acids research 43 (11), 5489-5500, 2015 | 43 | 2015 |
| BSSF: a fingerprint based ultrafast binding site similarity search and function analysis server B Xiong, J Wu, DL Burk, M Xue, H Jiang, J Shen BMC bioinformatics 11, 1-11, 2010 | 31 | 2010 |
| A novel role for transcription-coupled nucleotide excision repair for the in vivo repair of 3,N4-ethenocytosine IA Chaim, A Gardner, J Wu, T Iyama, DM Wilson III, LD Samson Nucleic acids research 45 (6), 3242-3252, 2017 | 21 | 2017 |
| DrugViz: a Cytoscape plugin for visualizing and analyzing small molecule drugs in biological networks B Xiong, K Liu, J Wu, DL Burk, H Jiang, J Shen Bioinformatics 24 (18), 2117-2118, 2008 | 21 | 2008 |
Michael Q. Zhangprofessor of university of texas at DallasVerified email at utdallas.edu
