| HMDB 3.0—the human metabolome database in 2013 DS Wishart, T Jewison, AC Guo, M Wilson, C Knox, Y Liu, Y Djoumbou, ... Nucleic acids research 41 (D1), D801-D807, 2012 | 3305 | 2012 |
| Predicting the mutations generated by repair of Cas9-induced double-strand breaks F Allen, L Crepaldi, C Alsinet, AJ Strong, V Kleshchevnikov, P De Angeli, ... Nature biotechnology 37 (1), 64-72, 2019 | 499 | 2019 |
| CFM-ID: a web server for annotation, spectrum prediction and metabolite identification from tandem mass spectra F Allen, A Pon, M Wilson, R Greiner, D Wishart Nucleic acids research 42 (W1), W94-W99, 2014 | 465 | 2014 |
| Competitive fragmentation modeling of ESI-MS/MS spectra for putative metabolite identification F Allen, R Greiner, D Wishart Metabolomics 11, 98-110, 2015 | 461 | 2015 |
| Classification of a known sequence of motions and postures from accelerometry data using adapted Gaussian mixture models FR Allen, E Ambikairajah, NH Lovell, BG Celler Physiological measurement 27 (10), 935, 2006 | 269 | 2006 |
| CFM-ID 3.0: significantly improved ESI-MS/MS prediction and compound identification Y Djoumbou-Feunang, A Pon, N Karu, J Zheng, C Li, D Arndt, M Gautam, ... Metabolites 9 (4), 72, 2019 | 255 | 2019 |
| Agreement between two large pan-cancer CRISPR-Cas9 gene dependency data sets JM Dempster, C Pacini, S Pantel, FM Behan, T Green, J Krill-Burger, ... Nature communications 10 (1), 5817, 2019 | 203 | 2019 |
| Critical assessment of small molecule identification 2016: automated methods EL Schymanski, C Ruttkies, M Krauss, C Brouard, T Kind, K Dührkop, ... Journal of cheminformatics 9, 1-21, 2017 | 196 | 2017 |
| Binding of ISRIB reveals a regulatory site in the nucleotide exchange factor eIF2B AF Zyryanova, F Weis, A Faille, AA Alard, A Crespillo-Casado, Y Sekine, ... Science 359 (6383), 1533-1536, 2018 | 194 | 2018 |
| Computational prediction of electron ionization mass spectra to assist in GC/MS compound identification F Allen, A Pon, R Greiner, D Wishart Analytical chemistry 88 (15), 7689-7697, 2016 | 160 | 2016 |
| The ribosomal P-stalk couples amino acid starvation to GCN2 activation in mammalian cells HP Harding, A Ordonez, F Allen, L Parts, AJ Inglis, RL Williams, D Ron Elife 8, e50149, 2019 | 136 | 2019 |
| JACKS: joint analysis of CRISPR/Cas9 knockout screens F Allen, F Behan, A Khodak, F Iorio, K Yusa, M Garnett, L Parts Genome research 29 (3), 464-471, 2019 | 78 | 2019 |
| An adapted gaussian mixture model approach to accelerometry-based movement classification using time-domain features FR Allen, E Ambikairajah, NH Lovell, BG Celler 2006 International Conference of the IEEE Engineering in Medicine and …, 2006 | 75 | 2006 |
| Cas9-induced large deletions and small indels are controlled in a convergent fashion M Kosicki, F Allen, F Steward, K Tomberg, Y Pan, A Bradley Nature communications 13 (1), 3422, 2022 | 67 | 2022 |
| Minimal genome-wide human CRISPR-Cas9 library E Gonçalves, M Thomas, FM Behan, G Picco, C Pacini, F Allen, A Vinceti, ... Genome biology 22, 1-14, 2021 | 55 | 2021 |
| Language identification using warping and the shifted delta cepstrum F Allen, E Ambikairajah, J Epps 2005 IEEE 7th Workshop on Multimedia Signal Processing, 1-4, 2005 | 51 | 2005 |
| Warped magnitude and phase-based features for language identification F Allen, E Ambikairajah, J Epps 2006 IEEE International Conference on Acoustics Speech and Signal Processing …, 2006 | 29 | 2006 |
| Predicting base editing outcomes using position-specific sequence determinants A Pallaseni, EM Peets, J Koeppel, J Weller, T Vanderstichele, UL Ho, ... Nucleic Acids Research 50 (6), 3551-3564, 2022 | 26 | 2022 |
| Minimized double guide RNA libraries enable scale-limited CRISPR/Cas9 screens EM Peets, L Crepaldi, Y Zhou, F Allen, R Elmentaite, G Noell, G Turner, ... BioRxiv, 859652, 2019 | 15 | 2019 |
| Mutations generated by repair of Cas9-induced double strand breaks are predictable from surrounding sequence F Allen, L Crepaldi, C Alsinet, AJ Strong, V Kleshchevnikov, PD Angeli, ... bioRxiv, 400341, 2018 | 9 | 2018 |
