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pankaj kumar
pankaj kumar
Bioinformatics Core Director, Associate Professor, University of virginia
Verified email at virginia.edu
Title
Cited by
Cited by
Year
Meta-analysis of tRNA derived RNA fragments reveals that they are evolutionarily conserved and associate with AGO proteins to recognize specific RNA targets
P Kumar, J Anaya, SB Mudunuri, A Dutta
BMC Biology 12 (1), 78, 2014
5312014
Biogenesis and function of transfer RNA-related fragments (tRFs)
P Kumar, C Kuscu, A Dutta
Trends in biochemical sciences 41 (8), 679-689, 2016
4032016
tRNA fragments (tRFs) guide Ago to regulate gene expression post-transcriptionally in a Dicer-independent manner
C Kuscu, P Kumar, M Kiran, Z Su, A Malik, A Dutta
Rna 24 (8), 1093-1105, 2018
3072018
Extrachromosomal microDNAs and chromosomal microdeletions in normal tissues
Y Shibata, P Kumar, R Layer, S Willcox, JR Gagan, JD Griffith, A Dutta
Science 336 (6077), 82-86, 2012
2662012
tRFdb: a database for transfer RNA fragments
P Kumar, SB Mudunuri, J Anaya, A Dutta
Nucleic acids research 43 (D1), D141-D145, 2015
2312015
Normal and cancerous tissues release extrachromosomal circular DNA (eccDNA) into the circulation
P Kumar, LW Dillon, Y Shibata, AA Jazaeri, DR Jones, A Dutta
Molecular Cancer Research 15 (9), 1197-1205, 2017
1832017
Discoveries of extrachromosomal circles of DNA in normal and tumor cells
T Paulsen, P Kumar, MM Koseoglu, A Dutta
Trends in Genetics 34 (4), 270-278, 2018
1812018
Production of extrachromosomal microDNAs is linked to mismatch repair pathways and transcriptional activity
LW Dillon, P Kumar, Y Shibata, YH Wang, S Willcox, JD Griffith, ...
Cell reports 11 (11), 1749-1759, 2015
1482015
Marek's disease is a natural model for lymphomas overexpressing Hodgkin's disease antigen (CD30)
SC Burgess, JR Young, BJG Baaten, L Hunt, LNJ Ross, MS Parcells, ...
Proceedings of the National Academy of Sciences 101 (38), 13879-13884, 2004
1392004
Noncanonical roles of tRNAs: tRNA fragments and beyond
Z Su, B Wilson, P Kumar, A Dutta
Annual review of genetics 54, 47-69, 2020
1372020
ATAC-seq identifies thousands of extrachromosomal circular DNA in cancer and cell lines
P Kumar, S Kiran, S Saha, Z Su, T Paulsen, A Chatrath, Y Shibata, ...
Science advances 6 (20), eaba2489, 2020
1102020
Small extrachromosomal circular DNAs, microDNA, produce short regulatory RNAs that suppress gene expression independent of canonical promoters
T Paulsen, Y Shibata, P Kumar, L Dillon, A Dutta
Nucleic acids research 47 (9), 4586-4596, 2019
952019
Tuberculous meningitis in BCG vaccinated and unvaccinated children
R Kumar, A Dwivedi, P Kumar, N Kohli
Journal of Neurology, Neurosurgery & Psychiatry 76 (11), 1550-1554, 2005
652005
Molecular detection of virulence genes associated with pathogenicity of Klebsiella spp. isolated from the respiratory tract of apparently healthy as well as sick goats
T Aher, A Roy, P Kumar
Israel Journal of Veterinary Medicine 67 (4), 249-252, 2012
602012
Dynamic strain ageing of P91 grade steels of varied silicon content
AK Roy, P Kumar, D Maitra
Materials Science and Engineering: A 499 (1-2), 379-386, 2009
532009
Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: Implications on genome evolution and plasticity
VB Sreenu, P Kumar, J Nagaraju, HA Nagarajaram
BMC genomics 7, 1-10, 2006
482006
Isolation of Bluetongue Virus Serotype 1 from Culicoides vector Captured in Livestock Farms and Sequence Analysis of the Viral Genome Segment‐2
AI Dadawala, SK Biswas, W Rehman, K Chand, A De, BS Mathapati, ...
Transboundary and Emerging Diseases 59 (4), 361-368, 2012
442012
Simple sequence repeats in mycobacterial genomes
VB Sreenu, P Kumar, J Nagaraju, HA Nagarajaram
Journal of biosciences 32, 3-15, 2007
422007
Relationship of residual stress to dislocation density in cold-worked martensitic alloy
AK Roy, S Bandyopadhyay, SB Suresh, D Maitra, P Kumar, D Wells, L Ma
Materials Science and Engineering: A 416 (1-2), 134-138, 2006
392006
Isolation, identification and molecular characterization of Mycoplasma isolates from goats of Gujarat State, India.
P Kumar, A Roy, BB Bhanderi, BC Pal
Veterinarski Arhiv 81 (4), 443-458, 2011
382011
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