| Water mediation in protein folding and molecular recognition Y Levy, JN Onuchic Annu. Rev. Biophys. Biomol. Struct. 35, 389-415, 2006 | 1160 | 2006 |
| Effect of glycosylation on protein folding: a close look at thermodynamic stabilization D Shental-Bechor, Y Levy Proceedings of the National Academy of Sciences 105 (24), 8256-8261, 2008 | 668 | 2008 |
| Protein topology determines binding mechanism Y Levy, PG Wolynes, JN Onuchic Proceedings of the National Academy of Sciences 101 (2), 511-516, 2004 | 376 | 2004 |
| Conformational transitions of adenylate kinase: switching by cracking PC Whitford, O Miyashita, Y Levy, JN Onuchic Journal of molecular biology 366 (5), 1661-1671, 2007 | 333 | 2007 |
| Folding of glycoproteins: toward understanding the biophysics of the glycosylation code D Shental-Bechor, Y Levy Current opinion in structural biology 19 (5), 524-533, 2009 | 266 | 2009 |
| Water and proteins: A love–hate relationship Y Levy, JN Onuchic Proceedings of the National Academy of Sciences 101 (10), 3325-3326, 2004 | 257 | 2004 |
| P versus Q: Structural reaction coordinates capture protein folding on smooth landscapes SS Cho, Y Levy, PG Wolynes Proceedings of the National Academy of Sciences 103 (3), 586-591, 2006 | 249 | 2006 |
| A survey of flexible protein binding mechanisms and their transition states using native topology based energy landscapes Y Levy, SS Cho, JN Onuchic, PG Wolynes Journal of molecular biology 346 (4), 1121-1145, 2005 | 248 | 2005 |
| Fly-casting in protein− DNA binding: frustration between protein folding and electrostatics facilitates target recognition Y Levy, JN Onuchic, PG Wolynes Journal of the American Chemical Society 129 (4), 738-739, 2007 | 246 | 2007 |
| Protein sliding along DNA: dynamics and structural characterization O Givaty, Y Levy Journal of molecular biology 385 (4), 1087-1097, 2009 | 242 | 2009 |
| Intrinsically disordered regions as affinity tuners in protein–DNA interactions D Vuzman, Y Levy Molecular BioSystems 8 (1), 47-57, 2012 | 216 | 2012 |
| Domain swapping is a consequence of minimal frustration S Yang, SS Cho, Y Levy, MS Cheung, H Levine, PG Wolynes, JN Onuchic Proceedings of the National Academy of Sciences 101 (38), 13786-13791, 2004 | 200 | 2004 |
| Solvent effects on the energy landscapes and folding kinetics of polyalanine Y Levy, J Jortner, OM Becker Proceedings of the National Academy of Sciences 98 (5), 2188-2193, 2001 | 183 | 2001 |
| Searching DNA via a “Monkey Bar” mechanism: the significance of disordered tails D Vuzman, A Azia, Y Levy Journal of molecular biology 396 (3), 674-684, 2010 | 179 | 2010 |
| Nonnative electrostatic interactions can modulate protein folding: molecular dynamics with a grain of salt A Azia, Y Levy Journal of molecular biology 393 (2), 527-542, 2009 | 143 | 2009 |
| DNA search efficiency is modulated by charge composition and distribution in the intrinsically disordered tail D Vuzman, Y Levy Proceedings of the National Academy of Sciences 107 (49), 21004-21009, 2010 | 130 | 2010 |
| Assessment of CASP8 structure predictions for template free targets M Ben‐David, O Noivirt‐Brik, A Paz, J Prilusky, JL Sussman, Y Levy Proteins: Structure, Function, and Bioinformatics 77 (S9), 50-65, 2009 | 129 | 2009 |
| Frustration in protein–DNA binding influences conformational switching and target search kinetics A Marcovitz, Y Levy Proceedings of the National Academy of Sciences 108 (44), 17957-17962, 2011 | 123 | 2011 |
| Symmetry and frustration in protein energy landscapes: A near degeneracy resolves the Rop dimer-folding mystery Y Levy, SS Cho, T Shen, JN Onuchic, PG Wolynes Proceedings of the National Academy of Sciences 102 (7), 2373-2378, 2005 | 119 | 2005 |
| The folding and dimerization of HIV-1 protease: evidence for a stable monomer from simulations Y Levy, A Caflisch, JN Onuchic, PG Wolynes Journal of molecular biology 340 (1), 67-79, 2004 | 116 | 2004 |
