| Binning metagenomic contigs by coverage and composition J Alneberg, BS Bjarnason, I De Bruijn, M Schirmer, J Quick, UZ Ijaz, ... Nature methods 11 (11), 1144-1146, 2014 | 2117 | 2014 |
| Fat, fibre and cancer risk in African Americans and rural Africans SJD O’Keefe, JV Li, L Lahti, J Ou, F Carbonero, K Mohammed, JM Posma, ... Nature communications 6 (1), 1-14, 2015 | 1057 | 2015 |
| Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men A Salonen, L Lahti, J Salojärvi, G Holtrop, K Korpela, SH Duncan, P Date, ... The ISME journal 8 (11), 2218-2230, 2014 | 667 | 2014 |
| Tools for microbiome analysis in R L Lahti, S Shetty, T Blake, J Salojarvi Version 1 (5), 28, 2017 | 493 | 2017 |
| Metagenomics meets time series analysis: unraveling microbial community dynamics K Faust, L Lahti, D Gonze, WM De Vos, J Raes Current opinion in microbiology 25, 56-66, 2015 | 449 | 2015 |
| Intestinal microbiota in healthy adults: temporal analysis reveals individual and common core and relation to intestinal symptoms J Jalanka-Tuovinen, A Salonen, J Nikkilä, O Immonen, R Kekkonen, ... PloS one 6 (7), e23035, 2011 | 430 | 2011 |
| microbiome R package L Lahti, S Shetty | 393 | 2017 |
| CDKN2A, NF2, and JUN are dysregulated among other genes by miRNAs in malignant mesothelioma—A miRNA microarray analysis M Guled, L Lahti, PM Lindholm, K Salmenkivi, I Bagwan, AG Nicholson, ... Genes, Chromosomes and Cancer 48 (7), 615-623, 2009 | 334 | 2009 |
| Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort Y Qin, AS Havulinna, Y Liu, P Jousilahti, SC Ritchie, A Tokolyi, ... Nature Genetics 54 (2), 134-142, 2022 | 285 | 2022 |
| Tipping elements in the human intestinal ecosystem L Lahti, J Salojärvi, A Salonen, M Scheffer, WM De Vos Nature communications 5 (1), 4344, 2014 | 280 | 2014 |
| Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment LJ Marcos-Zambrano, K Karaduzovic-Hadziabdic, T Loncar Turukalo, ... Frontiers in microbiology 12, 634511, 2021 | 274 | 2021 |
| Intestinal microbiome landscaping: insight in community assemblage and implications for microbial modulation strategies SA Shetty, F Hugenholtz, L Lahti, H Smidt, WM de Vos FEMS microbiology reviews 41 (2), 182-199, 2017 | 227 | 2017 |
| Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data L Lahti, A Salonen, RA Kekkonen, J Salojärvi, J Jalanka-Tuovinen, ... PeerJ 1, e32, 2013 | 226 | 2013 |
| Microbial communities as dynamical systems D Gonze, KZ Coyte, L Lahti, K Faust Current opinion in microbiology 44, 41-49, 2018 | 175 | 2018 |
| Improved taxonomic assignment of human intestinal 16S rRNA sequences by a dedicated reference database J Ritari, J Salojärvi, L Lahti, WM de Vos BMC genomics 16, 1-10, 2015 | 171 | 2015 |
| Integrative analysis of microRNA, mRNA and aCGH data reveals asbestos‐and histology‐related changes in lung cancer P Nymark, M Guled, I Borze, A Faisal, L Lahti, K Salmenkivi, E Kettunen, ... Genes, Chromosomes and Cancer 50 (8), 585-597, 2011 | 157 | 2011 |
| The adult intestinal core microbiota is determined by analysis depth and health status A Salonen, J Salojärvi, L Lahti, WM de Vos Clinical Microbiology and Infection 18, 16-20, 2012 | 152 | 2012 |
| Greengenes2 unifies microbial data in a single reference tree D McDonald, Y Jiang, M Balaban, K Cantrell, Q Zhu, A Gonzalez, ... Nature biotechnology 42 (5), 715-718, 2024 | 142 | 2024 |
| Gut microbiota composition is associated with temperament traits in infants AK Aatsinki, L Lahti, HM Uusitupa, E Munukka, A Keskitalo, S Nolvi, ... Brain, behavior, and immunity 80, 849-858, 2019 | 140 | 2019 |
| Introduction to the microbiome R package L Lahti, S Shetty Preprint at https://microbiome. github. io/tutorials, 2018 | 127 | 2018 |
Teemu NiiranenUniversity of Turku and National Institute for Health and WelfareVerified email at utu.fi
