Paul Kearney
Paul Kearney
Data Incites
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An information-based sequence distance and its application to whole mitochondrial genome phylogeny
M Li, JH Badger, X Chen, S Kwong, P Kearney, H Zhang
Bioinformatics 17 (2), 149-154, 2001
Organelle proteomics: looking at less to see more
S Brunet, P Thibault, E Gagnon, P Kearney, JJM Bergeron, M Desjardins
Trends in cell biology 13 (12), 629-638, 2003
A blood-based proteomic classifier for the molecular characterization of pulmonary nodules
X Li, C Hayward, PY Fong, M Dominguez, SW Hunsucker, LW Lee, ...
Science translational medicine 5 (207), 207ra142-207ra142, 2013
Factors influencing the distribution patterns of Recent deep-sea benthic foraminifera, east of New Zealand, Southwest Pacific Ocean
BW Hayward, H Neil, R Carter, HR Grenfell, JJ Hayward
Marine Micropaleontology 46 (1-2), 139-176, 2002
A polynomial time approximation scheme for inferring evolutionary trees from quartet topologies and its application
T Jiang, P Kearney, M Li
SIAM Journal on Computing 30 (6), 1942-1961, 2001
Extensive cell envelope modulation is associated with virulence in Brucella abortus
J Lamontagne, H Butler, E Chaves-Olarte, J Hunter, M Schirm, C Paquet, ...
Journal of proteome research 6 (4), 1519-1529, 2007
Management of pulmonary nodules by community pulmonologists: a multicenter observational study
NT Tanner, J Aggarwal, MK Gould, P Kearney, G Diette, A Vachani, ...
Chest 148 (6), 1405-1414, 2015
Quartet cleaning: improved algorithms and simulations
V Berry, T Jiang, P Kearney, M Li, T Wareham
European Symposium on Algorithms, 313-324, 1999
Modulation of the phagosome proteome by interferon-γ
I Jutras, M Houde, N Currier, J Boulais, S Duclos, S LaBoissiere, ...
Molecular & Cellular Proteomics 7 (4), 697-715, 2008
Bioinformatics meets proteomics—bridging the gap between mass spectrometry data analysis and cell biology
P Kearney, P Thibault
Journal of bioinformatics and computational biology 1 (01), 183-200, 2003
Phylogenetic k-root and Steiner k-root
GH Lin, PE Kearney, T Jiang
International Symposium on Algorithms and Computation, 539-551, 2000
Orchestrating quartets: approximation and data correction
T Jiang, P Kearney, M Li
Proceedings 39th Annual Symposium on Foundations of Computer Science (Cat …, 1998
Analysis of codon usage patterns of bacterial genomes using the self-organizing map
HC Wang, J Badger, P Kearney, M Li
Molecular Biology and Evolution 18 (5), 792-800, 2001
Computing the quartet distance between evolutionary trees
D Bryant, J Tsang, PE Kearney, M Li
Symposium on Discrete Algorithms: Proceedings of the eleventh annual ACM …, 2000
A practical algorithm for recovering the best supported edges of an evolutionary tree
V Berry, D Bryant, T Jiang, PE Kearney, M Li, T Wareham, H Zhang
SODA, 287-296, 2000
Development and validation of a spontaneous preterm delivery predictor in asymptomatic women
GR Saade, KA Boggess, SA Sullivan, GR Markenson, JD Iams, ...
American journal of obstetrics and gynecology 214 (5), 633. e1-633. e24, 2016
Assessment of plasma proteomics biomarker’s ability to distinguish benign from malignant lung nodules: results of the PANOPTIC (Pulmonary Nodule plasma proteomic classifier) trial
GA Silvestri, NT Tanner, P Kearney, A Vachani, PP Massion, A Porter, ...
Chest 154 (3), 491-500, 2018
Tree powers
PE Kearney, DG Corneil
Journal of Algorithms 29 (1), 111-131, 1998
Validation of a multiprotein plasma classifier to identify benign lung nodules
A Vachani, HI Pass, WN Rom, DE Midthun, ES Edell, M Laviolette, XJ Li, ...
Journal of Thoracic Oncology 10 (4), 629-637, 2015
Organ messenger ribonucleic acid and plasma proteome changes in the adjuvant-induced arthritis model: responses to disease induction and therapy with the estrogen receptor-β …
MT Follettie, M Pinard, JC Keith, L Wang, D Chelsky, C Hayward, ...
Endocrinology 147 (2), 714-723, 2006
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