Alexander Schönhuth

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Citations	6313	3925
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Tobias MarschallHeinrich Heine University DüsseldorfVerified email at hhu.de
Alexander SchliepFull Professor, Faculty for Health Sciences, BTU Cottbus-SenftenbergVerified email at schlieplab.org
Gunnar W. KlauHeinrich Heine University DüsseldorfVerified email at hhu.de
Ivan G. CostaProfessor, Institute of Computational Genomics, RWTH AachenVerified email at rwth-aachen.de
Leen StougieSenior Researcher CWI, Prof. of Operations Research Vrije Universiteit, AmsterdamVerified email at cwi.nl
Paul I W de BakkerVertex PharmaceuticalsVerified email at vrtx.com
Murray PattersonAssistant Professor, Georgia State UniversityVerified email at cs.gsu.edu
Nadia PisantiUniversity of Pisa & Erable Team INRIAVerified email at di.unipi.it
Laurent FrancioliVertex PharmaceuticalsVerified email at vrtx.com
Cisca Wijmenga, PhDERC advanced investigator; Professor of Human Genetics, Dept Genetics (MGE), UMCG, Groningen, theVerified email at umcg.nl
S. Cenk SahinalpSenior Investigator, Cancer Data Science Lab, National Cancer Institute, NIHVerified email at nih.gov
Leo van IerselAssociate professor, TU DelftVerified email at tudelft.nl
Martin EsterDistinguished Professor of Computer Science, Simon Fraser UniversityVerified email at cs.sfu.ca
Fereydoun HormozdiariAssociate Professor at University of California - DavisVerified email at ucdavis.edu
Alice Carolyn McHardyHelmholtz Centre for Infection Research, GermanyVerified email at helmholtz-hzi.de
Aaron Colak, PhDHead of AI, QualtricsVerified email at qualtrics.com
Kai YeXi'an Jiaotong UniversityVerified email at xjtu.edu.cn
Victor GuryevEuropean Research Institute for the Biology of Ageing, University of GroningenVerified email at umcg.nl
Iman HajirasoulihaAssociate Professor, Weill Cornell Medicine of Cornell University, New York CityVerified email at med.cornell.edu
Artem CherkasovUniversity of British ColumbiaVerified email at interchange.ubc.ca

Alexander Schönhuth

Professor, Faculty for Technology, Bielefeld University

Verified email at cebitec.uni-bielefeld.de - Homepage

Deep Learning in Genomics Computational Genomics Data Science Bioinformatics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Eleven grand challenges in single-cell data science D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... Genome biology 21, 1-35, 2020	1065	2020
Whole-genome sequence variation, population structure and demographic history of the Dutch population Nature genetics 46 (8), 818-825, 2014	725	2014
Genome-wide patterns and properties of de novo mutations in humans LC Francioli, PP Polak, A Koren, A Menelaou, S Chun, I Renkens, ... Nature genetics 47 (7), 822-826, 2015	419	2015
WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L Van Iersel, L Stougie, GW Klau, ... Journal of Computational Biology 22 (6), 498-509, 2015	375	2015
Computational pan-genomics: status, promises and challenges Briefings in bioinformatics 19 (1), 118-135, 2018	345	2018
Using hidden Markov models to analyze gene expression time course data A Schliep, A Schönhuth, C Steinhoff Bioinformatics 19 (suppl_1), i255-i263, 2003	343	2003
WhatsHap: fast and accurate read-based phasing M Martin, M Patterson, S Garg, S O Fischer, N Pisanti, GW Klau, ... BioRxiv, 085050, 2016	287	2016
Characteristics of de novo structural changes in the human genome WP Kloosterman, LC Francioli, F Hormozdiari, T Marschall, JY Hehir-Kwa, ... Genome research 25 (6), 792-801, 2015	157	2015
Improved imputation quality of low-frequency and rare variants in European samples using the ‘Genome of The Netherlands’ P Deelen, A Menelaou, EM Van Leeuwen, A Kanterakis, F Van Dijk, ... European Journal of Human Genetics 22 (11), 1321-1326, 2014	125	2014
Viral quasispecies assembly via maximal clique enumeration. A Töpfer, T Marschall, RA Bull, F Luciani, A Schönhuth, N Beerenwinkel PLoS Computational Biology 10 (3), e1003515, 2014	123	2014
ProClust: improved clustering of protein sequences with an extended graph-based approach P Pipenbacher, A Schliep, S Schneckener, A Schönhuth, D Schomburg, ... Bioinformatics 18 (suppl_2), S182-S191, 2002	122	2002
De novo assembly of viral quasispecies using overlap graphs JA Baaijens, AZ El Aabidine, E Rivals, A Schönhuth Genome research 27 (5), 835-848, 2017	113	2017
CLEVER: Clique-Enumerating Variant Finder T Marschall, I Costa, S Canzar, M Bauer, G Klau, A Schliep, A Schönhuth Bioinformatics 28 (22), 2875-2882, 2012	110	2012
A high-quality human reference panel reveals the complexity and distribution of genomic structural variants JY Hehir-Kwa, T Marschall, WP Kloosterman, LC Francioli, JA Baaijens, ... Nature communications 7 (1), 12989, 2016	109	2016
Population-specific genotype imputations using minimac or IMPUTE2 EM Van Leeuwen, A Kanterakis, P Deelen, MV Kattenberg, PE Slagboom, ... Nature protocols 10 (9), 1285-1296, 2015	105	2015
Analyzing gene expression time-courses A Schliep, IG Costa, C Steinhoff, A Schonhuth IEEE/ACM Transactions on computational biology and bioinformatics 2 (3), 179-193, 2005	97	2005
Discovering motifs that induce sequencing errors M Allhoff, A Schönhuth, M Martin, IG Costa, S Rahmann, T Marschall BMC bioinformatics 14, 1-10, 2013	84	2013
Leveraging distant relatedness to quantify human mutation and gene-conversion rates PF Palamara, LC Francioli, PR Wilton, G Genovese, A Gusev, ... The American Journal of Human Genetics 97 (6), 775-789, 2015	80	2015
Automatic discovery of 100-miRNA signature for cancer classification using ensemble feature selection A Lopez-Rincon, M Martinez-Archundia, GU Martinez-Ruiz, A Schoenhuth, ... BMC bioinformatics 20, 1-17, 2019	78	2019
Inferring cancer subnetwork markers using density-constrained biclustering P Dao, R Colak, R Salari, F Moser, E Davicioni, A Schönhuth, M Ester Bioinformatics 26 (18), i625-i631, 2010	75	2010

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