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Ron Boger
Ron Boger
UC Berkeley
Verified email at berkeley.edu - Homepage
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Year
Classifying and comparing approaches to subspace clustering with missing data
C Lane, R Boger, C You, M Tsakiris, B Haeffele, R Vidal
Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2019
182019
CasPEDIA Database: a functional classification system for class 2 CRISPR-Cas enzymes
BA Adler, MI Trinidad, D Bellieny-Rabelo, E Zhang, HM Karp, ...
Nucleic acids research 52 (D1), D590-D596, 2024
52024
Eukaryotic RNA-guided endonucleases evolved from a unique clade of bacterial enzymes
PH Yoon, P Skopintsev, H Shi, LX Chen, BA Adler, M Al-Shimary, ...
Nucleic Acids Research 51 (22), 12414-12427, 2023
42023
Crispr2vec: machine learning model predicts off-target cuts of crispr systems
TB Trivedi, R Boger, GM Kamath, G Evangelopoulos, J Cate, J Doudna, ...
bioRxiv, 2020.10. 28.359885, 2020
42020
Genome-wide Characterization of Diverse Bacteriophages Enabled by RNA-Binding CRISPRi
BA Adler, MJ Al-Shimary, JR Patel, E Ambruster, D Colognori, EJ Charles, ...
bioRxiv, 2023.09. 18.558157, 2023
32023
RNA language models predict mutations that improve RNA function
Y Shulgina, MI Trinidad, CJ Langeberg, H Nisonoff, S Chithrananda, ...
bioRxiv, 2024.04. 05.588317, 2024
2024
TOPH (True Retrieval Of Proteins Homologs): Adapting A Contrastive Question-Answering Framework for Protein Search
R Boger, A Lu, S Chithrananda, K Yang, P Skopintsev, B Adler, E Wallace, ...
ICML Workshop on Computational Biology, 2023
2023
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