| dRep: a tool for fast and accurate genomic comparisons that enables improved genome recovery from metagenomes through de-replication MR Olm, CT Brown, B Brooks, JF Banfield The ISME journal 11 (12), 2864-2868, 2017 | 1279 | 2017 |
| Schrödinger’s microbes: tools for distinguishing the living from the dead in microbial ecosystems JB Emerson, RI Adams, CMB Román, B Brooks, DA Coil, K Dahlhausen, ... Microbiome 5, 1-23, 2017 | 444 | 2017 |
| Clades of huge phages from across Earth’s ecosystems B Al-Shayeb, R Sachdeva, LX Chen, F Ward, P Munk, A Devoto, ... Nature 578 (7795), 425-431, 2020 | 387 | 2020 |
| Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants B Brooks, BA Firek, CS Miller, I Sharon, BC Thomas, R Baker, ... Microbiome 2, 1-16, 2014 | 286 | 2014 |
| Strain-resolved analysis of hospital rooms and infants reveals overlap between the human and room microbiome B Brooks, MR Olm, BA Firek, R Baker, BC Thomas, MJ Morowitz, ... Nature communications 8 (1), 1814, 2017 | 186 | 2017 |
| Gut bacteria are rarely shared by co-hospitalized premature infants, regardless of necrotizing enterocolitis development T Raveh-Sadka, BC Thomas, A Singh, B Firek, B Brooks, CJ Castelle, ... Elife 4, e05477, 2015 | 150 | 2015 |
| Identical bacterial populations colonize premature infant gut, skin, and oral microbiomes and exhibit different in situ growth rates MR Olm, CT Brown, B Brooks, B Firek, R Baker, D Burstein, K Soenjoyo, ... Genome research 27 (4), 601-612, 2017 | 109 | 2017 |
| The developing premature infant gut microbiome is a major factor shaping the microbiome of neonatal intensive care unit rooms B Brooks, MR Olm, BA Firek, R Baker, D Geller-McGrath, SR Reimer, ... Microbiome 6, 1-12, 2018 | 83 | 2018 |
| Genome-resolved metagenomics of eukaryotic populations during early colonization of premature infants and in hospital rooms MR Olm, PT West, B Brooks, BA Firek, R Baker, MJ Morowitz, JF Banfield Microbiome 7, 1-16, 2019 | 61 | 2019 |
| Disturbances of the perioperative microbiome across multiple body sites in patients undergoing pancreaticoduodenectomy MB Rogers, V Aveson, B Firek, A Yeh, B Brooks, R Brower-Sinning, ... Pancreas 46 (2), 260-267, 2017 | 57 | 2017 |
| Metaproteomics reveals functional shifts in microbial and human proteins during a preterm infant gut colonization case JC Young, C Pan, RM Adams, B Brooks, JF Banfield, MJ Morowitz, ... Proteomics 15 (20), 3463-3473, 2015 | 57 | 2015 |
| Concentrations and sources of airborne particles in a neonatal intensive care unit D Licina, S Bhangar, B Brooks, R Baker, B Firek, X Tang, MJ Morowitz, ... PloS one 11 (5), e0154991, 2016 | 44 | 2016 |
| Strain-resolved microbial community proteomics reveals simultaneous aerobic and anaerobic function during gastrointestinal tract colonization of a preterm infant B Brooks, RS Mueller, JC Young, MJ Morowitz, RL Hettich, JF Banfield Frontiers in Microbiology 6, 139284, 2015 | 35 | 2015 |
| High-resolution temporal profiling of the human gut microbiome reveals consistent and cascading alterations in response to dietary glycans R Creswell, J Tan, JW Leff, B Brooks, MA Mahowald, R Thieroff-Ekerdt, ... Genome Medicine 12, 1-16, 2020 | 20 | 2020 |
| A pilot study on the effect of prebiotic on host-microbial co-metabolism in peritoneal dialysis patients B Gao, N Alonzo-Palma, B Brooks, A Jose, D Barupal, M Jagadeesan, ... Kidney International Reports 5 (8), 1309-1315, 2020 | 13 | 2020 |
| dRep: a tool for fast and accurate genome de-replication that enables tracking of microbial genotypes and improved genome recovery from metagenomes MR Olm, CT Brown, B Brooks, JF Banfield bioRxiv, 108142, 2017 | 12 | 2017 |
| Pilot study of sources and concentrations of size-resolved airborne particles in a neonatal intensive care unit S Bhangar, B Brooks, B Firek, D Licina, X Tang, MJ Morowitz, JF Banfield, ... Building and Environment 106, 10-19, 2016 | 12 | 2016 |
| Social media marketing on Twitter: An investigation of the involvement-messaging-engagement link CK Coursaris, W van Osch, B Brooks HCI in Business: First International Conference, HCIB 2014, Held as Part of …, 2014 | 7 | 2014 |
| Effects of organization-level Internet governance: a mixed-method case study approach to social media governance BA Brooks Michigan State University, 2015 | 3 | 2015 |
| Strain-level overlap between infant and hospital fungal microbiomes revealed through de novo assembly of eukaryotic genomes from metagenomes MR Olm, PT West, B Brooks, BA Firek, R Baker, MJ Morowitz, JF Banfield bioRxiv, 324566, 2018 | 2 | 2018 |
Jillian BANFIELDUniversity of California BerkeleyVerified email at berkeley.edu
